RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ZNF217O75362 1048 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 GNA14O95837 355 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 MOCS2O96007 188 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-202ENST00000430200 SERPINF2P08697 491 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 C7P10643 843 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 PON1P27169 355 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 CD6P30203 668 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 HOXD12P35452 270 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 GGCXP38435 758 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 RING1Q06587 406 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 SEMA3BQ13214 749 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 STARD3Q14849 445 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 STILQ15468 1287 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 ARHGAP44Q17R89 818 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 FNDC3BQ53EP0 1204 aaKnown RBP12.24□□□□□ -0.45
HDAC4-202ENST00000430200 MIIPQ5JXC2 388 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 MBLAC2Q68D91 279 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 SDE2Q6IQ49 451 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 LAYNQ6UX15 382 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 FAM124AQ86V42 546 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 ZCCHC9Q8N567 271 aaKnown RBP12.24□□□□□ -0.45
HDAC4-202ENST00000430200 C1orf216Q8TAB5 229 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 FAM149B1Q96BN6 582 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 CAMK1GQ96NX5 476 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 GTPBP2Q9BX10 602 aaKnown RBP12.24□□□□□ -0.45
HDAC4-202ENST00000430200 NUSAP1Q9BXS6 441 aaKnown RBP12.24□□□□□ -0.45
HDAC4-202ENST00000430200 CLSTN2Q9H4D0 955 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 ITM2CQ9NQX7 267 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 STIM2Q9P246 746 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 APEX2Q9UBZ4 518 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 ANGPTL2Q9UKU9 493 aa12.24□□□□□ -0.45
HDAC4-202ENST00000430200 ANKRD11Q6UB99 2663 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-202ENST00000430200 CABIN1Q9Y6J0 2220 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 I6L893 689 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-202ENST00000430200 FBXO21O94952 628 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 CD59P13987 128 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 CSRP1P21291 193 aaKnown RBP12.23□□□□□ -0.45
HDAC4-202ENST00000430200 ACSL1P33121 698 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 RPS14P62263 151 aaKnown RBP12.23□□□□□ -0.45
HDAC4-202ENST00000430200 FOXC1Q12948 553 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 GRIK2Q13002 908 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 BYSLQ13895 437 aaKnown RBP12.23□□□□□ -0.45
HDAC4-202ENST00000430200 DUOXA1Q1HG43 343 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 ZC3H12AQ5D1E8 599 aaKnown RBP12.23□□□□□ -0.45
HDAC4-202ENST00000430200 MS4A13Q5J8X5 152 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 DAB2IPQ5VWQ8 1189 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 RAP1GAP2Q684P5 730 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 NUGGCQ68CJ6 796 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 METTL3Q86U44 580 aaKnown RBP12.23□□□□□ -0.45
HDAC4-202ENST00000430200 AHI1Q8N157 1196 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 C1orf131Q8NDD1 294 aaKnown RBP12.23□□□□□ -0.45
HDAC4-202ENST00000430200 OR52K2Q8NGK3 314 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 TMA16Q96EY4 203 aaKnown RBP12.23□□□□□ -0.45
HDAC4-202ENST00000430200 SIPA1Q96FS4 1042 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 C6orf106Q9H6K1 298 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-202ENST00000430200 IL21RQ9HBE5 538 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 PLCB1Q9NQ66 1216 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 PRSS16Q9NQE7 514 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 ANLNQ9NQW6 1124 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 SLC6A14Q9UN76 642 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 TLR6Q9Y2C9 796 aa12.23□□□□□ -0.45
HDAC4-202ENST00000430200 C1QTNF9BB2RNN3 333 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 ARHGAP33O14559 1287 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 GRAP2O75791 330 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 ERBB2P04626 1255 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 C1QTNF9P0C862 333 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 TFE3P19532 575 aaPredicted RBP12.22□□□□□ -0.45
HDAC4-202ENST00000430200 CSKP41240 450 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 STK19P49842 368 aaPredicted RBP12.22□□□□□ -0.45
HDAC4-202ENST00000430200 METAP1P53582 386 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 CENPCQ03188 943 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 NNTQ13423 1086 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 MEA1Q16626 185 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 PTPN20Q4JDL3 420 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 DCAF6Q58WW2 860 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 ARTNQ5T4W7 220 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 DCAF12L1Q5VU92 463 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 FAM183BPQ6ZVS7 135 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 TMEM110Q86TL2 294 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 SLC47A2Q86VL8 602 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 MFN1Q8IWA4 741 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 APCDD1Q8J025 514 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 HJURPQ8NCD3 748 aaPredicted RBP12.22□□□□□ -0.45
HDAC4-202ENST00000430200 OR2T3Q8NH03 318 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 WFIKKN2Q8TEU8 576 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 UCMAQ8WVF2 138 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 DNASE2BQ8WZ79 361 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 PRCCQ92733 491 aaPredicted RBP12.22□□□□□ -0.45
HDAC4-202ENST00000430200 SERPINB11Q96P15 392 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 SLC2A13Q96QE2 648 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
HDAC4-202ENST00000430200 ORAI3Q9BRQ5 295 aa12.22□□□□□ -0.45
HDAC4-202ENST00000430200 COL5A1P20908 1838 aaPredicted RBP12.21□□□□□ -0.45
HDAC4-202ENST00000430200 MEI4A8MW99 385 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 C10orf142B7Z368 130 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 NPC1O15118 1278 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 SYNCRIPO60506 623 aaKnown RBP12.21□□□□□ -0.45
HDAC4-202ENST00000430200 NDUFS2O75306 463 aa12.21□□□□□ -0.45
HDAC4-202ENST00000430200 TRUB2O95900 331 aaKnown RBP12.21□□□□□ -0.45
HDAC4-202ENST00000430200 DLDP09622 509 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms