RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 SERPINA6P08185 405 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 CPA3P15088 417 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 DESP17661 470 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 VCLP18206 1134 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 ARL4AP40617 200 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 CNGA3Q16281 694 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 BOLA3Q53S33 107 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 DCAF15Q66K64 600 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 CATSPERGQ6ZRH7 1159 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 UBR7Q8N806 425 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 AGBL3Q8NEM8 1001 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 B4GALNT2Q8NHY0 566 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 CELF6Q96J87 481 aaKnown RBP12.82□□□□□ -0.36
CDH3-202ENST00000429102 MPP4Q96JB8 637 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 TMEM134Q9H6X4 195 aa12.82□□□□□ -0.36
CDH3-202ENST00000429102 XPO1O14980 1071 aaKnown RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 ZBTB14O43829 449 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 FAM189A1O60320 539 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 VDRP11473 427 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 P4HA1P13674 534 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 VAV1P15498 845 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 ARF4P18085 180 aaPredicted RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 PLK1P53350 603 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 MXD4Q14582 209 aaPredicted RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 PDK1Q15118 436 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 CERCAMQ5T4B2 595 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 MAVSQ7Z434 540 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 PCDH20Q8N6Y1 951 aaKnown RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 MCRS1Q96EZ8 462 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 TBCBQ99426 244 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 PRPF18Q99633 342 aaKnown RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 CYP4F12Q9HCS2 524 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 ETAA1Q9NY74 926 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 NFASCO94856 1347 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 TK2O00142 265 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 MFSD11O43934 449 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 PMLP29590 882 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 GNL1P36915 607 aaPredicted RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 NDUFV1P49821 464 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 POU5F1BQ06416 359 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 LIN52Q52LA3 116 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 TEX44Q53QW1 395 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 C6orf52Q5T4I8 152 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 TMCO4Q5TGY1 634 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 PPP1R2P3Q6NXS1 205 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 CYP4V2Q6ZWL3 525 aaPredicted RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 TMEM174Q8WUU8 243 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 HTR3CQ8WXA8 447 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 C7orf26Q96N11 449 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 CENPKQ9BS16 269 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 KLHL4Q9C0H6 718 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 TASP1Q9H6P5 420 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 SSU72Q9NP77 194 aaKnown RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 IARS2Q9NSE4 1012 aaKnown RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 DTLQ9NZJ0 730 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 SIRPGQ9P1W8 387 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 TUBGCP4Q9UGJ1 667 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 SSX2IPQ9Y2D8 614 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 TIMM13Q9Y5L4 95 aaPredicted RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 LAMA2P24043 3122 aaKnown RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 SDR42E2A6NKP2 422 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 TMEM233B4DJY2 109 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 FGF3P11487 239 aaPredicted RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 NAGLUP54802 743 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 FOLH1Q04609 750 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 CCNIQ14094 377 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 PDK3Q15120 406 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 TRPM4Q8TD43 1214 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 TFB1MQ8WVM0 346 aaKnown RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 LRGUKQ96M69 825 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 KCTD15Q96SI1 283 aaPredicted RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 NDNQ99608 321 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 EPAS1Q99814 870 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 PRDM12Q9H4Q4 367 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 ELP3Q9H9T3 547 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 IL1RL2Q9HB29 575 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 PGAP2Q9UHJ9 254 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 EMCNQ9ULC0 261 aa12.81□□□□□ -0.36
CDH3-202ENST00000429102 BARX2Q9UMQ3 279 aaPredicted RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 HEMK1Q9Y5R4 338 aaPredicted RBP12.81□□□□□ -0.36
CDH3-202ENST00000429102 ANKRD12Q6UB98 2062 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 C9JVG2 144 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 NDC80O14777 642 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 PLIN3O60664 434 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 SULT1E1P49888 294 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 AP3M2P53677 418 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 CYP2R1Q6VVX0 501 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 NAPRTQ6XQN6 538 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 MYLK4Q86YV6 388 aaPredicted RBP12.8□□□□□ -0.36
CDH3-202ENST00000429102 REPS2Q8NFH8 660 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 EXT2Q93063 718 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 CSPG4P5Q96PW8 444 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 LHX5Q9H2C1 402 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 LIN28AQ9H9Z2 209 aaKnown RBP12.8□□□□□ -0.36
CDH3-202ENST00000429102 DTNAQ9Y4J8 743 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 WNK3Q9BYP7 1800 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 A0A1B0GTW7 788 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 TPST1O60507 370 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 MAGEC1O60732 1142 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 HDCP19113 662 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms