RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 APOC2P02655 101 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 KLKB1P03952 638 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 UQCRHP07919 91 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 TGM2P21980 687 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 CORO1AP31146 461 aaKnown RBP11.2□□□□□ -0.62
CRIM1-204ENST00000428774 LTBRP36941 435 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 KPNA1P52294 538 aaPredicted RBP11.2□□□□□ -0.62
CRIM1-204ENST00000428774 SLC7A9P82251 487 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 ADAM15Q13444 863 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 TFDP2Q14188 446 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 ELF2Q15723 593 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 ERCC6LQ2NKX8 1250 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 RARS2Q5T160 578 aaKnown RBP11.2□□□□□ -0.62
CRIM1-204ENST00000428774 GPR158Q5T848 1215 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 RAP1GAP2Q684P5 730 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 C8orf74Q6P047 294 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 POTEHQ6S545 545 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 TMC5Q6UXY8 1006 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 EP400NLQ6ZTU2 488 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 CHSY1Q86X52 802 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 NPWQ8N729 165 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 EFHBQ8N7U6 833 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 SLC35B2Q8TB61 432 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 ING5Q8WYH8 240 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 TBC1D31Q96DN5 1066 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 MYEOVQ96EZ4 313 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 BTN2A3PQ96KV6 586 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 PRICKLE1Q96MT3 831 aaPredicted RBP11.2□□□□□ -0.62
CRIM1-204ENST00000428774 PRMT1Q99873 361 aaKnown RBP11.2□□□□□ -0.62
CRIM1-204ENST00000428774 SLC46A2Q9BY10 475 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 EPC1Q9H2F5 836 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 SLITRK6Q9H5Y7 841 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 LRRC19Q9H756 370 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 CLDND1Q9NY35 253 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 CLEC1BQ9P126 229 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 SAE1Q9UBE0 346 aaPredicted RBP11.2□□□□□ -0.62
CRIM1-204ENST00000428774 OR12D3Q9UGF7 316 aa11.2□□□□□ -0.62
CRIM1-204ENST00000428774 GOLGA6L7A0A1B0GV03 622 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 SCAMP3O14828 347 aaKnown RBP11.19□□□□□ -0.62
CRIM1-204ENST00000428774 MAP3K6O95382 1288 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 CKMP06732 381 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 RHOXF2BP0C7M4 288 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 PFKLP17858 780 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 ERCC2P18074 760 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 HDCP19113 662 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 TACR2P21452 398 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 SLC6A4P31645 630 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 CHRNA3P32297 505 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 COILP38432 576 aaPredicted RBP11.19□□□□□ -0.62
CRIM1-204ENST00000428774 PTGIRP43119 386 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 KCNJ1P48048 391 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 HCAR3P49019 387 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 FNTAP49354 379 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 ZNF135P52742 658 aaPredicted RBP11.19□□□□□ -0.62
CRIM1-204ENST00000428774 COG7P83436 770 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 GBE1Q04446 702 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 USP4Q13107 963 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 SNX1Q13596 522 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 PAFAH1B3Q15102 231 aaKnown RBP11.19□□□□□ -0.62
CRIM1-204ENST00000428774 CCNG2Q16589 344 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 CTC1Q2NKJ3 1217 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 FAM133BQ5BKY9 247 aaKnown RBP11.19□□□□□ -0.62
CRIM1-204ENST00000428774 ANKRD54Q6NXT1 300 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 SYCE2Q6PIF2 218 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 C1orf228Q6PIY5 440 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 CCDC137Q6PK04 289 aaKnown RBP11.19□□□□□ -0.62
CRIM1-204ENST00000428774 TMEM184AQ6ZMB5 413 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 Q6ZNB5 142 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 UNC45BQ8IWX7 931 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 NETO2Q8NC67 525 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 RIN3Q8TB24 985 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 MAGOHBQ96A72 148 aaKnown RBP11.19□□□□□ -0.62
CRIM1-204ENST00000428774 RHOXF2Q9BQY4 288 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 TRIM51Q9BSJ1 452 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 LRRC1Q9BTT6 524 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 MAK16Q9BXY0 300 aaKnown RBP11.19□□□□□ -0.62
CRIM1-204ENST00000428774 SMG9Q9H0W8 520 aaKnown RBP11.19□□□□□ -0.62
CRIM1-204ENST00000428774 TASP1Q9H6P5 420 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 ANKZF1Q9H8Y5 726 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 PIDD1Q9HB75 910 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 AMACRQ9UHK6 382 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 DNPEPQ9ULA0 475 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 VANGL2Q9ULK5 521 aa11.19□□□□□ -0.62
CRIM1-204ENST00000428774 CHD5Q8TDI0 1954 aa11.18□□□□□ -0.62
CRIM1-204ENST00000428774 SHROOM3Q8TF72 1996 aa11.18□□□□□ -0.62
CRIM1-204ENST00000428774 IGLV3-10A0A075B6K4 115 aa11.18□□□□□ -0.62
CRIM1-204ENST00000428774 ZSCAN5CA6NGD5 496 aaPredicted RBP11.18□□□□□ -0.62
CRIM1-204ENST00000428774 H3BQ06 376 aaPredicted RBP11.18□□□□□ -0.62
CRIM1-204ENST00000428774 TTI1O43156 1089 aa11.18□□□□□ -0.62
CRIM1-204ENST00000428774 PRAMEF12O95522 483 aa11.18□□□□□ -0.62
CRIM1-204ENST00000428774 SRGAP2BP0DMP2 458 aa11.18□□□□□ -0.62
CRIM1-204ENST00000428774 DDX6P26196 483 aaKnown RBP eCLIP11.18□□□□□ -0.62
CRIM1-204ENST00000428774 EPHB2P29323 1055 aa11.18□□□□□ -0.62
CRIM1-204ENST00000428774 HTR7P34969 479 aa11.18□□□□□ -0.62
CRIM1-204ENST00000428774 SGSHP51688 502 aa11.18□□□□□ -0.62
CRIM1-204ENST00000428774 VCPP55072 806 aaKnown RBP11.18□□□□□ -0.62
CRIM1-204ENST00000428774 MLLT6P55198 1093 aaPredicted RBP11.18□□□□□ -0.62
CRIM1-204ENST00000428774 SLC10A2Q12908 348 aaPredicted RBP11.18□□□□□ -0.62
CRIM1-204ENST00000428774 AUHQ13825 339 aaKnown RBP11.18□□□□□ -0.62
CRIM1-204ENST00000428774 COL19A1Q14993 1142 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms