RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 ANKMY1Q9P2S6 941 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 STK17AQ9UEE5 414 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 UTP20O75691 2785 aaKnown RBP12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 LRRK2Q5S007 2527 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 SLC12A8A0AV02 714 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 H3BQV1 296 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 CLIC2O15247 247 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 DXOO77932 396 aaKnown RBP12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 C7P10643 843 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 MYF5P13349 255 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 ATICP31939 592 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 RXRGP48443 463 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 LSSP48449 732 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 CASP4P49662 377 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 NDST1P52848 882 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 PPP2CBP62714 309 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 PPP2CAP67775 309 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 ZSCAN23Q3MJ62 389 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 SLC45A4Q5BKX6 768 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 C3orf38Q5JPI3 329 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 MBLAC2Q68D91 279 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 CCDC81Q6ZN84 652 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 USP30Q70CQ3 517 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 ADIPOR2Q86V24 386 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 OXR1Q8N573 874 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 GOLGA1Q92805 767 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 OMDQ99983 421 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 RSPH9Q9H1X1 276 aaPredicted RBP12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 NEUROG2Q9H2A3 272 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 KIAA1586Q9HCI6 787 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 GGA2Q9UJY4 613 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 TEP1Q99973 2627 aaKnown RBP12.12□□□□□ -0.47
ALMS1P1-201ENST00000428767 FRMD3A2A2Y4 597 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 FFAR2O15552 330 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 OPA1O60313 960 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 SIN3BO75182 1162 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 PABPC1P11940 636 aaKnown RBP12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 SYT1P21579 422 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 HOXD13P35453 343 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 KIF11P52732 1056 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 CST6Q15828 149 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 MPPE1Q53F39 396 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 CDCP2Q5VXM1 449 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 RRAGBQ5VZM2 374 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 FOXR1Q6PIV2 292 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 ZNF574Q6ZN55 896 aaPredicted RBP12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 ATG14Q6ZNE5 492 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 MMAAQ8IVH4 418 aaKnown RBP12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 WFDC5Q8TCV5 224 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 OSBPL2Q9H1P3 480 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 CAAP1Q9H8G2 361 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 CHMP5Q9NZZ3 219 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 MARCH2Q9P0N8 246 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 CCDC39Q9UFE4 941 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 SUN2Q9UH99 717 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 SATB2Q9UPW6 733 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 KIF3AQ9Y496 699 aa12.11□□□□□ -0.47
ALMS1P1-201ENST00000428767 A0A1B0GVM2 712 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 DLDP09622 509 aaKnown RBP12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 PDCP20941 246 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 PSMD8P48556 350 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 PSEN1P49768 467 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 CCR5P51681 352 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 SGSHP51688 502 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 HS1BP3Q53T59 392 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 NAPEPLDQ6IQ20 393 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 RSRC2Q7L4I2 434 aaKnown RBP12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 CCDC186Q7Z3E2 898 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 AHI1Q8N157 1196 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 OR14C36Q8NHC7 312 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 CDK5RAP1Q96SZ6 601 aaKnown RBP12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 ERVMER34-1Q9H9K5 563 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 AGPAT3Q9NRZ7 376 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 STRIP2Q9ULQ0 834 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 SCML1Q9UN30 329 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 RP1P56715 2156 aa12.1□□□□□ -0.47
ALMS1P1-201ENST00000428767 PMS2P1A4D2B8 440 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 RNASEH1O60930 286 aaKnown RBP12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 ATP5BP06576 529 aaKnown RBP12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 PDIA4P13667 645 aaKnown RBP12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 POLR2EP19388 210 aaKnown RBP12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 RBMS1P29558 406 aaKnown RBP12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 MAT2AP31153 395 aaKnown RBP12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 CD70P32970 193 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 ADPRHP54922 357 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 ZNF211Q13398 564 aaPredicted RBP12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 NCOA4Q13772 614 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 PKP1Q13835 747 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 BMT2Q1RMZ1 405 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 POM121L1PQ3SYA9 428 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 STXBP4Q6ZWJ1 553 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 NELFCDQ8IXH7 590 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 FAM217AQ8IXS0 508 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 CCDC65Q8IXS2 484 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 CRYBG2Q8N1P7 616 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 SLC25A45Q8N413 288 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 PLEKHO2Q8TD55 490 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 PLD4Q96BZ4 506 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms