RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 FSTL4Q6MZW2 842 aa15.06■□□□□ 0
SGCE-204ENST00000428696 SLFN11Q7Z7L1 901 aa15.06■□□□□ 0
SGCE-204ENST00000428696 C14orf80Q86SX3 495 aa15.06■□□□□ 0
SGCE-204ENST00000428696 CCDC185Q8N715 623 aa15.06■□□□□ 0
SGCE-204ENST00000428696 HJURPQ8NCD3 748 aaPredicted RBP15.06■□□□□ 0
SGCE-204ENST00000428696 SLC35G2Q8TBE7 412 aa15.06■□□□□ 0
SGCE-204ENST00000428696 ZNF564Q8TBZ8 553 aaPredicted RBP15.06■□□□□ 0
SGCE-204ENST00000428696 CENPIQ92674 756 aaPredicted RBP15.06■□□□□ 0
SGCE-204ENST00000428696 C11orf16Q9NQ32 467 aa15.06■□□□□ 0
SGCE-204ENST00000428696 TMEM51Q9NW97 253 aa15.06■□□□□ 0
SGCE-204ENST00000428696 ARHGEF38Q9NXL2 777 aa15.06■□□□□ 0
SGCE-204ENST00000428696 IP6K2Q9UHH9 426 aa15.06■□□□□ 0
SGCE-204ENST00000428696 STOML2Q9UJZ1 356 aa15.06■□□□□ 0
SGCE-204ENST00000428696 SHISA7A6NL88 538 aa15.05■□□□□ -0
SGCE-204ENST00000428696 PRR33A8MZF0 331 aa15.05■□□□□ -0
SGCE-204ENST00000428696 PRPSAP2O60256 369 aa15.05■□□□□ -0
SGCE-204ENST00000428696 DRD1P21728 446 aa15.05■□□□□ -0
SGCE-204ENST00000428696 NAP1L1P55209 391 aaKnown RBP15.05■□□□□ -0
SGCE-204ENST00000428696 MESP2Q0VG99 397 aa15.05■□□□□ -0
SGCE-204ENST00000428696 LRRC32Q14392 662 aa15.05■□□□□ -0
SGCE-204ENST00000428696 MESDQ14696 234 aa15.05■□□□□ -0
SGCE-204ENST00000428696 C2orf27AQ580R0 203 aa15.05■□□□□ -0
SGCE-204ENST00000428696 TMEM196Q5HYL7 178 aa15.05■□□□□ -0
SGCE-204ENST00000428696 DAB2IPQ5VWQ8 1189 aa15.05■□□□□ -0
SGCE-204ENST00000428696 CWF19L1Q69YN2 538 aaKnown RBP15.05■□□□□ -0
SGCE-204ENST00000428696 RWDD4Q6NW29 188 aaKnown RBP15.05■□□□□ -0
SGCE-204ENST00000428696 FBXL22Q6P050 247 aa15.05■□□□□ -0
SGCE-204ENST00000428696 RAD9BQ6WBX8 426 aa15.05■□□□□ -0
SGCE-204ENST00000428696 KIAA1328Q86T90 577 aa15.05■□□□□ -0
SGCE-204ENST00000428696 MFN1Q8IWA4 741 aa15.05■□□□□ -0
SGCE-204ENST00000428696 SFTPA1Q8IWL2 248 aa15.05■□□□□ -0
SGCE-204ENST00000428696 FAM217AQ8IXS0 508 aa15.05■□□□□ -0
SGCE-204ENST00000428696 P2RY11Q96G91 374 aa15.05■□□□□ -0
SGCE-204ENST00000428696 HAPLN3Q96S86 360 aa15.05■□□□□ -0
SGCE-204ENST00000428696 LRFN3Q9BTN0 628 aa15.05■□□□□ -0
SGCE-204ENST00000428696 MAGEB5Q9BZ81 275 aa15.05■□□□□ -0
SGCE-204ENST00000428696 ZWILCHQ9H900 591 aa15.05■□□□□ -0
SGCE-204ENST00000428696 OSGEPQ9NPF4 335 aa15.05■□□□□ -0
SGCE-204ENST00000428696 MARK1Q9P0L2 795 aa15.05■□□□□ -0
SGCE-204ENST00000428696 CLEC4EQ9ULY5 219 aa15.05■□□□□ -0
SGCE-204ENST00000428696 NENFQ9UMX5 172 aa15.05■□□□□ -0
SGCE-204ENST00000428696 TECTAO75443 2155 aa15.04■□□□□ -0
SGCE-204ENST00000428696 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.04■□□□□ -0
SGCE-204ENST00000428696 EIF3CLB5ME19 914 aaKnown RBP15.04■□□□□ -0
SGCE-204ENST00000428696 CACNG3O60359 315 aa15.04■□□□□ -0
SGCE-204ENST00000428696 PENKP01210 267 aaPredicted RBP15.04■□□□□ -0
SGCE-204ENST00000428696 AOC1P19801 751 aa15.04■□□□□ -0
SGCE-204ENST00000428696 HOXD9P28356 352 aaPredicted RBP15.04■□□□□ -0
SGCE-204ENST00000428696 AVPR2P30518 371 aa15.04■□□□□ -0
SGCE-204ENST00000428696 GJC1P36383 396 aa15.04■□□□□ -0
SGCE-204ENST00000428696 GRIA2P42262 883 aa15.04■□□□□ -0
SGCE-204ENST00000428696 ZNF177Q13360 481 aaPredicted RBP15.04■□□□□ -0
SGCE-204ENST00000428696 CDH18Q13634 790 aa15.04■□□□□ -0
SGCE-204ENST00000428696 PIGHQ14442 188 aaPredicted RBP15.04■□□□□ -0
SGCE-204ENST00000428696 EFHC2Q5JST6 749 aa15.04■□□□□ -0
SGCE-204ENST00000428696 ZFYVE27Q5T4F4 411 aa15.04■□□□□ -0
SGCE-204ENST00000428696 BMP8AQ7Z5Y6 402 aa15.04■□□□□ -0
SGCE-204ENST00000428696 CCDC105Q8IYK2 499 aa15.04■□□□□ -0
SGCE-204ENST00000428696 TMEM105Q8N8V8 129 aa15.04■□□□□ -0
SGCE-204ENST00000428696 IGSF8Q969P0 613 aa15.04■□□□□ -0
SGCE-204ENST00000428696 PRICKLE1Q96MT3 831 aaPredicted RBP15.04■□□□□ -0
SGCE-204ENST00000428696 EIF3CQ99613 913 aaKnown RBP15.04■□□□□ -0
SGCE-204ENST00000428696 CIPCQ9C0C6 399 aa15.04■□□□□ -0
SGCE-204ENST00000428696 ZDHHC4Q9NPG8 344 aa15.04■□□□□ -0
SGCE-204ENST00000428696 ABCB8Q9NUT2 735 aa15.04■□□□□ -0
SGCE-204ENST00000428696 SPATA6Q9NWH7 488 aaPredicted RBP15.04■□□□□ -0
SGCE-204ENST00000428696 GPATCH2LQ9NWQ4 482 aa15.04■□□□□ -0
SGCE-204ENST00000428696 UVRAGQ9P2Y5 699 aa15.04■□□□□ -0
SGCE-204ENST00000428696 OR12D3Q9UGF7 316 aa15.04■□□□□ -0
SGCE-204ENST00000428696 E9PAM4 449 aa15.03■□□□□ -0
SGCE-204ENST00000428696 I6L893 689 aaPredicted RBP15.03■□□□□ -0
SGCE-204ENST00000428696 CREB3O43889 395 aa15.03■□□□□ -0
SGCE-204ENST00000428696 CHRNB1P11230 501 aa15.03■□□□□ -0
SGCE-204ENST00000428696 TNNT1P13805 278 aa15.03■□□□□ -0
SGCE-204ENST00000428696 MIPP30301 263 aa15.03■□□□□ -0
SGCE-204ENST00000428696 TIE1P35590 1138 aa15.03■□□□□ -0
SGCE-204ENST00000428696 ZNF252P-AS1Q0IIN9 211 aa15.03■□□□□ -0
SGCE-204ENST00000428696 DGKKQ5KSL6 1271 aa15.03■□□□□ -0
SGCE-204ENST00000428696 EMC10Q5UCC4 262 aa15.03■□□□□ -0
SGCE-204ENST00000428696 Q6ZS52 159 aa15.03■□□□□ -0
SGCE-204ENST00000428696 ETFBKMTQ8IXQ9 262 aa15.03■□□□□ -0
SGCE-204ENST00000428696 PYROXD2Q8N2H3 581 aa15.03■□□□□ -0
SGCE-204ENST00000428696 ACRBPQ8NEB7 543 aa15.03■□□□□ -0
SGCE-204ENST00000428696 HSPH1Q92598 858 aa15.03■□□□□ -0
SGCE-204ENST00000428696 PRMT1Q99873 361 aaKnown RBP15.03■□□□□ -0
SGCE-204ENST00000428696 DESI2Q9BSY9 194 aa15.03■□□□□ -0
SGCE-204ENST00000428696 DHX35Q9H5Z1 703 aaKnown RBP15.03■□□□□ -0
SGCE-204ENST00000428696 MPP6Q9NZW5 540 aa15.03■□□□□ -0
SGCE-204ENST00000428696 F5P12259 2224 aa15.03■□□□□ -0
SGCE-204ENST00000428696 NRDCO43847 1150 aa15.02■□□□□ -0
SGCE-204ENST00000428696 RNF40O75150 1001 aa15.02■□□□□ -0
SGCE-204ENST00000428696 CISD3P0C7P0 127 aa15.02■□□□□ -0
SGCE-204ENST00000428696 EIF2DP41214 584 aaKnown RBP15.02■□□□□ -0
SGCE-204ENST00000428696 KRT83P78385 493 aa15.02■□□□□ -0
SGCE-204ENST00000428696 GEN1Q17RS7 908 aa15.02■□□□□ -0
SGCE-204ENST00000428696 BNIPLQ7Z465 357 aa15.02■□□□□ -0
SGCE-204ENST00000428696 TFAP2DQ7Z6R9 452 aa15.02■□□□□ -0
SGCE-204ENST00000428696 RHOT2Q8IXI1 618 aa15.02■□□□□ -0
SGCE-204ENST00000428696 CCDC33Q8N5R6 958 aa15.02■□□□□ -0
SGCE-204ENST00000428696 FNIP1Q8TF40 1166 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms