RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ZNF135P52742 658 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 COPS2P61201 443 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 AMPD2Q01433 879 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 AUHQ13825 339 aaKnown RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 PPP2R5EQ16537 467 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 FAM133BQ5BKY9 247 aaKnown RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 ADGRF1Q5T601 910 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 ACBD5Q5T8D3 534 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 FAM72AQ5TYM5 149 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 FAM72DQ6L9T8 149 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 FBXL22Q6P050 247 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 RFWD3Q6PCD5 774 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 Q6ZNB5 142 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 HTR3DQ70Z44 454 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 MTSS1LQ765P7 747 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 TFAP2DQ7Z6R9 452 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 ADAT2Q7Z6V5 191 aaKnown RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 FAM72BQ86X60 149 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 YAF2Q8IY57 180 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 HJURPQ8NCD3 748 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 BPIFB1Q8TDL5 484 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 BHMTQ93088 406 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 E2F7Q96AV8 911 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 RSPRY1Q96DX4 576 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 PBKQ96KB5 322 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 C1orf74Q96LT6 269 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 PRICKLE1Q96MT3 831 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 PRMT1Q99873 361 aaKnown RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 KXD1Q9BQD3 176 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 MAK16Q9BXY0 300 aaKnown RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 OSBPL8Q9BZF1 889 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 OSBPL2Q9H1P3 480 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZFP14Q9HCL3 533 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 ARHGEF4Q9NR80 690 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 THG1LQ9NWX6 298 aaKnown RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 SMARCAL1Q9NZC9 954 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 CWC15Q9P013 229 aaKnown RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 STIM2Q9P246 746 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 RCOR3Q9P2K3 495 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 TBC1D14Q9P2M4 693 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 FAM50BQ9Y247 325 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 WNT6Q9Y6F9 365 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZNF487B1APH4 448 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 CES2O00748 559 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 APOL1O14791 398 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 GREM1O60565 184 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 TJP3O95049 919 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 CYBBP04839 570 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 KRT10P13645 584 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 TCF3P15923 654 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 PRLRP16471 622 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 HTR7P34969 479 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 IRAK1P51617 712 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 MLLT6P55198 1093 aaPredicted RBP8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 RPS24P62847 133 aaKnown RBP8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 NRG1Q02297 640 aaPredicted RBP8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 CKAP4Q07065 602 aaKnown RBP8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 SEMA3BQ13214 749 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 DPYSQ14117 519 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 TFDP2Q14188 446 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 GRM2Q14416 872 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 LONRF2Q1L5Z9 754 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 LEXMQ3ZCV2 418 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 ANKRD20A8PQ5CZ79 823 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 MANEALQ5VSG8 457 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 TTC39BQ5VTQ0 682 aaPredicted RBP8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 TANGO2Q6ICL3 276 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 PTCRAQ6ISU1 281 aaPredicted RBP8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 PARM1Q6UWI2 310 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 TMCO3Q6UWJ1 677 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 TPGS1Q6ZTW0 290 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 ANKS1BQ7Z6G8 1248 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 C14orf80Q86SX3 495 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 CIR1Q86X95 450 aaPredicted RBP8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 VSIG1Q86XK7 387 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 SLC13A5Q86YT5 568 aaPredicted RBP8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 CFAP52Q8N1V2 620 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 TSC1Q92574 1164 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 IGSF8Q969P0 613 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 AZIN2Q96A70 460 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 HAUS1Q96CS2 278 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 MS4A14Q96JA4 679 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 RPGRIP1Q96KN7 1286 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 NAP1L3Q99457 506 aaPredicted RBP8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 PHF7Q9BWX1 381 aaPredicted RBP8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZYG11BQ9C0D3 744 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 CATSPERBQ9H7T0 1116 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 TRPV4Q9HBA0 871 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 DUS2Q9NX74 493 aaKnown RBP8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 OBP2AQ9NY56 170 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 MPP6Q9NZW5 540 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 EPS15L1Q9UBC2 864 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 NR2E1Q9Y466 385 aa8.16□□□□□ -1.1
HMGA1P4-201ENST00000428643 GREB1Q4ZG55 1949 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 GOLGA6L10A0A0M3HER8 536 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 C2CD4DB7Z1M9 353 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 CST8O60676 142 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 TBL1XO60907 577 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 ECI2O75521 394 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 ADH1CP00326 375 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms