RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 NAT10Q9H0A0 1025 aaKnown RBP9.57□□□□□ -0.88
RFX3-AS1-202ENST00000427722 HSD3B7Q9H2F3 369 aa9.57□□□□□ -0.88
RFX3-AS1-202ENST00000427722 NLRC4Q9NPP4 1024 aa9.57□□□□□ -0.88
RFX3-AS1-202ENST00000427722 ABCB8Q9NUT2 735 aa9.57□□□□□ -0.88
RFX3-AS1-202ENST00000427722 DDIT4Q9NX09 232 aa9.57□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CALCOCO1Q9P1Z2 691 aa9.57□□□□□ -0.88
RFX3-AS1-202ENST00000427722 STIM2Q9P246 746 aa9.57□□□□□ -0.88
RFX3-AS1-202ENST00000427722 LIMA1Q9UHB6 759 aaKnown RBP9.57□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SIK3Q9Y2K2 1263 aa9.57□□□□□ -0.88
RFX3-AS1-202ENST00000427722 STON1Q9Y6Q2 735 aa9.57□□□□□ -0.88
RFX3-AS1-202ENST00000427722 EPN2O95208 641 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 LSM8O95777 96 aaKnown RBP9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 IGLV3-25P01717 112 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 GLI1P08151 1106 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 MMEP08473 750 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 PABPC1P11940 636 aaKnown RBP9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 ATP1A3P13637 1013 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 GABRG2P18507 467 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 NDUFV2P19404 249 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 TGM1P22735 817 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 PRKCHP24723 683 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 HLA-FP30511 346 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CDH5P33151 784 aaPredicted RBP9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SOX5P35711 763 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 MPLP40238 635 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 IL12RB1P42701 662 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SNX16P57768 344 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 RPS24P62847 133 aaKnown RBP9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 ARID5AQ03989 594 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 NME3Q13232 169 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CDH18Q13634 790 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 STARD3Q14849 445 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 EIF4HQ15056 248 aaKnown RBP9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 C2CD6Q53TS8 623 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 EFHC1Q5JVL4 640 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 PLA2G2CQ5R387 149 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 PIK3R6Q5UE93 754 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 RAP1GAP2Q684P5 730 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 KIAA1324Q6UXG2 1013 aaKnown RBP9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CHST9Q7L1S5 443 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SLC26A9Q7LBE3 791 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 C11orf74Q86VG3 221 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CACUL1Q86Y37 369 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 MFN1Q8IWA4 741 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 LGI2Q8N0V4 545 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 GPR161Q8N6U8 529 aaKnown RBP9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 MSANTD4Q8NCY6 345 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 WFDC5Q8TCV5 224 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CYB5D2Q8WUJ1 264 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SLC20A1Q8WUM9 679 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 DDX1Q92499 740 aaKnown RBP9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 RMDN1Q96DB5 314 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 MYEOVQ96EZ4 313 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SLC2A11Q9BYW1 496 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SLC6A17Q9H1V8 727 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 ARRDC1-AS1Q9H2J1 176 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SEMA4GQ9NTN9 838 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 ASNSD1Q9NWL6 643 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 GGA2Q9UJY4 613 aa9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 NOCTQ9UK39 431 aaKnown RBP9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.56□□□□□ -0.88
RFX3-AS1-202ENST00000427722 WASH3PC4AMC7 463 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 GOLGA8SH3BPF8 625 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SYNCRIPO60506 623 aaKnown RBP9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 RHOBTB1O94844 696 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CD70P32970 193 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 P2RY2P41231 377 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SULT1E1P49888 294 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 JAM2P57087 298 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 RNASE9P60153 205 aaKnown RBP9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 NOMO3P69849 1222 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CDR2Q01850 454 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SLC6A3Q01959 620 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CREB5Q02930 508 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 ZNF234Q14588 700 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 MAP7D1Q3KQU3 841 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 FUT11Q495W5 492 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 FNDC3BQ53EP0 1204 aaKnown RBP9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 MS4A13Q5J8X5 152 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 FAM102AQ5T9C2 384 aaPredicted RBP9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 PMS2CLQ68D20 193 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 TMEM215Q68D42 235 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 SERPINA13PQ6UXR4 307 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 PRR23CQ6ZRP0 262 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 ARMCX6Q7L4S7 300 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 APTXQ7Z2E3 356 aaKnown RBP9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 ERICH1Q86X53 443 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 ZDHHC17Q8IUH5 632 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 DHX40Q8IX18 779 aaKnown RBP9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 AHI1Q8N157 1196 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CFAP52Q8N1V2 620 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CARNMT1Q8N4J0 409 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 FRMD1Q8N878 549 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 NEK11Q8NG66 645 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 OLIG1Q8TAK6 271 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 WFIKKN2Q8TEU8 576 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 CPA5Q8WXQ8 436 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 RNF34Q969K3 372 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 AZIN2Q96A70 460 aa9.55□□□□□ -0.88
RFX3-AS1-202ENST00000427722 C18orf8Q96DM3 657 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms