RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 TNFSF9P41273 254 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 C21orf59P57076 290 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 Q4G0T1 1027 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 TTI2Q6NXR4 508 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 CRTC3Q6UUV7 619 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 CASP10Q92851 521 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 NEDD8-MDP1E9PL57 170 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 BTN3A1O00481 513 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 SEC22BO75396 215 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 RRM2P31350 389 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 SERPINA13PQ6UXR4 307 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 RIPOR1Q6ZS17 1223 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 SPPL2AQ8TCT8 520 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 SGSM3Q96HU1 749 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 GMCL1Q96IK5 515 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 PPCSQ9HAB8 311 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 SERPINB8P50452 374 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 ZC3H12AQ5D1E8 599 aaKnown RBP13.46□□□□□ -0.26
SPG11-202ENST00000427534 DGKKQ5KSL6 1271 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 TMEM154Q6P9G4 183 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 CNSTQ6PJW8 725 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 SAPCD2Q86UD0 394 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 ZSWIM1Q9BR11 485 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 ULBP1Q9BZM6 244 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 HEY2Q9UBP5 337 aa13.46□□□□□ -0.26
SPG11-202ENST00000427534 KIAA1210Q9ULL0 1709 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 OR4Q2P0C623 313 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 GRK4P32298 578 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 RANBP1P43487 201 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 EVX2Q03828 476 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 ABRQ12979 859 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 SLC27A1Q6PCB7 646 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 MICU2Q8IYU8 434 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 ATP8B4Q8TF62 1192 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 VAPBO95292 243 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 TAF13Q15543 124 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 TARBP2Q15633 366 aaKnown RBP13.45□□□□□ -0.26
SPG11-202ENST00000427534 SCIMPQ6UWF3 145 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 ROPN1BQ9BZX4 212 aaPredicted RBP13.45□□□□□ -0.26
SPG11-202ENST00000427534 ILKAPQ9H0C8 392 aaPredicted RBP13.45□□□□□ -0.26
SPG11-202ENST00000427534 ROPN1Q9HAT0 212 aaPredicted RBP13.45□□□□□ -0.26
SPG11-202ENST00000427534 RGS18Q9NS28 235 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 USP15Q9Y4E8 981 aaPredicted RBP13.45□□□□□ -0.26
SPG11-202ENST00000427534 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.45□□□□□ -0.26
SPG11-202ENST00000427534 EML1O00423 815 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 FKTNO75072 461 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 ACRP10323 421 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 REXO4Q9GZR2 422 aaKnown RBP13.45□□□□□ -0.26
SPG11-202ENST00000427534 E5RJQ4 531 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 H0Y858 1186 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 SMAPO00193 183 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 PCYT1AP49585 367 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 DSG4Q86SJ6 1040 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 FIBCD1Q8N539 461 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 ARNTL2Q8WYA1 636 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 PAPOLBQ9NRJ5 636 aaKnown RBP13.45□□□□□ -0.26
SPG11-202ENST00000427534 SAC3D1A6NKF1 404 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 CASP7P55210 303 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 AMPD2Q01433 879 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 HSPA14Q0VDF9 509 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 TCHHL1Q5QJ38 904 aaPredicted RBP13.45□□□□□ -0.26
SPG11-202ENST00000427534 ZNF720Q7Z2F6 126 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 GPR142Q7Z601 462 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 FNDC5Q8NAU1 212 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 NDRG1Q92597 394 aaKnown RBP13.45□□□□□ -0.26
SPG11-202ENST00000427534 FERD3LQ96RJ6 166 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 CARD9Q9H257 536 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 NEUROD4Q9HD90 331 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 SCN3BQ9NY72 215 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 KANSL3Q9P2N6 904 aa13.45□□□□□ -0.26
SPG11-202ENST00000427534 IQGAP1P46940 1657 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 LRRIQ3A6PVS8 624 aaPredicted RBP13.44□□□□□ -0.26
SPG11-202ENST00000427534 CD86P42081 329 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 BOLA3Q53S33 107 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 FAAH2Q6GMR7 532 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 MACC1Q6ZN28 852 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 GLMNQ92990 594 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 AGXT2Q9BYV1 514 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 DNAJC5Q9H3Z4 198 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 IGF2BP3O00425 579 aaKnown RBP eCLIP13.44□□□□□ -0.26
SPG11-202ENST00000427534 SPAG6O75602 509 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 IGSF6O95976 241 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 HDCP19113 662 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 UTS2BQ765I0 119 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 SV2AQ7L0J3 742 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 CHPFQ8IZ52 775 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 ALLCQ8N6M5 410 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 ZSCAN18Q8TBC5 510 aaPredicted RBP13.44□□□□□ -0.26
SPG11-202ENST00000427534 SOCS4Q8WXH5 440 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 RBBP8Q99708 897 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 RIOX1Q9H6W3 641 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 SEMA4BQ9NPR2 832 aaPredicted RBP13.44□□□□□ -0.26
SPG11-202ENST00000427534 PHTF1Q9UMS5 762 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 GAS2O43903 313 aaKnown RBP13.44□□□□□ -0.26
SPG11-202ENST00000427534 BANF1O75531 89 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 ALBP02768 609 aa13.44□□□□□ -0.26
SPG11-202ENST00000427534 CDH2P19022 906 aaPredicted RBP13.44□□□□□ -0.26
SPG11-202ENST00000427534 ADSLP30566 484 aaPredicted RBP13.44□□□□□ -0.26
SPG11-202ENST00000427534 ZNF571Q7Z3V5 609 aaPredicted RBP13.44□□□□□ -0.26
SPG11-202ENST00000427534 GPR156Q8NFN8 814 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms