RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 TBCCQ15814 346 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 DTX3LQ8TDB6 740 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 ACMSDQ8TDX5 336 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 HTR3CQ8WXA8 447 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 STMN2Q93045 179 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 C1orf21Q9H246 121 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 ETAA1Q9NY74 926 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 ZNF212Q9UDV6 495 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 RPS6KL1Q9Y6S9 549 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 CTGFP29279 349 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 PSEN2P49810 448 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 KLC1Q07866 573 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 AP1B1Q10567 949 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 TUBB3Q13509 450 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 FASTKD1Q53R41 847 aaKnown RBP14.7□□□□□ -0.06
LIG1-202ENST00000427526 GLRA4Q5JXX5 417 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 MBLAC2Q68D91 279 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 DENND5BQ6ZUT9 1274 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 ARNTL2Q8WYA1 636 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 ZNF778Q96MU6 729 aa14.7□□□□□ -0.06
LIG1-202ENST00000427526 LBHD1Q9BQE6 289 aaPredicted RBP14.7□□□□□ -0.06
LIG1-202ENST00000427526 A0A0A0MRY4 1105 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 SMIM35A0A1B0GVV1 85 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 PRR5-ARHGAP8B1AHC4 643 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 HCRTO43612 131 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 DARSP14868 501 aaKnown RBP14.69□□□□□ -0.06
LIG1-202ENST00000427526 GOT1P17174 413 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 ADAM17P78536 824 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 ARHGAP8P85298 464 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 KDSRQ06136 332 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 LBRQ14739 615 aaKnown RBP14.69□□□□□ -0.06
LIG1-202ENST00000427526 MDH1BQ5I0G3 518 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 LRRC8BQ6P9F7 803 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 NET1Q7Z628 596 aaPredicted RBP14.69□□□□□ -0.06
LIG1-202ENST00000427526 SCUBE1Q8IWY4 988 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 PYROXD2Q8N2H3 581 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 ANKRD52Q8NB46 1076 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 OR6B3Q8NGW1 331 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 TFB1MQ8WVM0 346 aaKnown RBP14.69□□□□□ -0.06
LIG1-202ENST00000427526 FAM161BQ96MY7 647 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 SPATA13Q96N96 652 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 APOL6Q9BWW8 343 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 TUBGCP4Q9UGJ1 667 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 LRCH1Q9Y2L9 728 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 HACD1B0YJ81 288 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 SPECC1L-ADORA2AF8WAN1 911 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 FGF3P11487 239 aaPredicted RBP14.69□□□□□ -0.06
LIG1-202ENST00000427526 AOC1P19801 751 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 FDFT1P37268 417 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 ALDH18A1P54886 795 aaKnown RBP14.69□□□□□ -0.06
LIG1-202ENST00000427526 TEDDM1Q5T9Z0 273 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 SLC27A1Q6PCB7 646 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 LRRC52Q8N7C0 313 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 C7orf31Q8N865 590 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 C18orf25Q96B23 403 aaPredicted RBP14.69□□□□□ -0.06
LIG1-202ENST00000427526 SYT15Q9BQS2 421 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 SIKE1Q9BRV8 207 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 NXF3Q9H4D5 531 aaKnown RBP14.69□□□□□ -0.06
LIG1-202ENST00000427526 KRT82Q9NSB4 513 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 SLC17A6Q9P2U8 582 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 SORCS3Q9UPU3 1222 aa14.69□□□□□ -0.06
LIG1-202ENST00000427526 TNPO2O14787 897 aaKnown RBP14.68□□□□□ -0.06
LIG1-202ENST00000427526 ITM2AO43736 263 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 AKAP5P24588 427 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 TUBP50607 506 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 CRADDP78560 199 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 BST2Q10589 180 aaKnown RBP14.68□□□□□ -0.06
LIG1-202ENST00000427526 PDE1CQ14123 709 aaPredicted RBP14.68□□□□□ -0.06
LIG1-202ENST00000427526 DCAF4L1Q3SXM0 396 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 IRGCQ6NXR0 463 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 C16orf46Q6P387 395 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 PACS1Q6VY07 963 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 ULK2Q8IYT8 1036 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 HACE1Q8IYU2 909 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 SNX27Q96L92 541 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 PANX3Q96QZ0 392 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 ZIC5Q96T25 663 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 LGMNQ99538 433 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 AP5M1Q9H0R1 490 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 WASF2Q9Y6W5 498 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 HAS3O00219 553 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 PRKCGP05129 697 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 LCP1P13796 627 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 RGS2P41220 211 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 GRIK3Q13003 919 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 CRHR2Q13324 411 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 RCN2Q14257 317 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 DNAL1Q4LDG9 190 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 STRADAQ7RTN6 431 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 CRYBG2Q8N1P7 616 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 COLGALT1Q8NBJ5 622 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 PIWIL2Q8TC59 973 aaKnown RBP14.68□□□□□ -0.06
LIG1-202ENST00000427526 CLPTM1LQ96KA5 538 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 RILPQ96NA2 401 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 SLC7A8Q9UHI5 535 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 DNAH12Q6ZR08 3092 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 PLIN3O60664 434 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 UPP2O95045 317 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 CCDC130P13994 396 aa14.68□□□□□ -0.06
LIG1-202ENST00000427526 CPOXP36551 454 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms