RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PDZD8Q8NEN9 1154 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 CDK5RAP1Q96SZ6 601 aaKnown RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 PRDM12Q9H4Q4 367 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 RAB6BQ9NRW1 208 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 MRPL17Q9NRX2 175 aaKnown RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 NINJ2Q9NZG7 142 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 VPS18Q9P253 973 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 INSL6Q9Y581 213 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 ZNF638Q14966 1978 aaKnown RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 A0A0A0MRY4 1105 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 TCRBV7S3A2A0A539 114 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 GOLGA6L10A6NI86 522 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 EIF3HO15372 352 aaKnown RBP eCLIP15.66■□□□□ 0.1
ACTB-204ENST00000425660 HMGA1P17096 107 aaKnown RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 MX2P20592 715 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 TBX4P57082 545 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 ZNF33AQ06730 810 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 PPIDQ08752 370 aaKnown RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 GALNT2Q10471 571 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 KYNUQ16719 465 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 TMEM240Q5SV17 173 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 ACBD5Q5T8D3 534 aaPredicted RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 KLHDC10Q6PID8 442 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 CROCCP2Q86T23 111 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 CCDC110Q8TBZ0 833 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 LRRN4Q8WUT4 740 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 HDAC11Q96DB2 347 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 P2RY11Q96G91 374 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 TRMT2BQ96GJ1 504 aaKnown RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 SPATA13Q96N96 652 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 FRMD8Q9BZ67 464 aaPredicted RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 KLC2Q9H0B6 622 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 RXFP1Q9HBX9 757 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 DNAJC17Q9NVM6 304 aaKnown RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 MARCH2Q9P0N8 246 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 CXXC1Q9P0U4 656 aaPredicted RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 XPO7Q9UIA9 1087 aaKnown RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 HS3ST4Q9Y661 456 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 GOLGA6CA6NDK9 693 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 ZBBXA8MT70 800 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 HMGB1P1B2RPK0 211 aaPredicted RBP15.65■□□□□ 0.1
ACTB-204ENST00000425660 TLR5O60602 858 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 FGF18O76093 207 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 TBX18O95935 607 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 ABHD2P08910 425 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 GOLGA6DP0CG33 693 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 CSH1P0DML2 217 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 CSH2P0DML3 217 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 ARL4CP56559 192 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 CREMQ03060 361 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 IFFO1Q0D2I5 559 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 EFEMP1Q12805 493 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 MTA1Q13330 715 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 PSRC1Q6PGN9 363 aaPredicted RBP15.65■□□□□ 0.1
ACTB-204ENST00000425660 TP53INP2Q8IXH6 220 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 TCEAL8Q8IYN2 117 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 ZNF683Q8IZ20 524 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 FIBCD1Q8N539 461 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 CCDC33Q8N5R6 958 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 SP7Q8TDD2 431 aaPredicted RBP15.65■□□□□ 0.1
ACTB-204ENST00000425660 DPF3Q92784 378 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 ATP6V1G3Q96LB4 118 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 TTC25Q96NG3 672 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 FERMT1Q9BQL6 677 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 SIK2Q9H0K1 926 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 ZBP1Q9H171 429 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 GOLGA6AQ9NYA3 693 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 YIPF1Q9Y548 306 aa15.65■□□□□ 0.1
ACTB-204ENST00000425660 OPHN1O60890 802 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 TCEA3O75764 348 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 ACSL3O95573 720 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 CTSAP10619 480 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 GARSP41250 739 aaKnown RBP15.64■□□□□ 0.09
ACTB-204ENST00000425660 KPNA1P52294 538 aaPredicted RBP15.64■□□□□ 0.09
ACTB-204ENST00000425660 GAD2Q05329 585 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 WASHC5Q12768 1159 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 C10orf120Q5SQS8 335 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 PIK3R6Q5UE93 754 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 TADA2BQ86TJ2 420 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 LZTR1Q8N653 840 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 TBC1D31Q96DN5 1066 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 BTN2A3PQ96KV6 586 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 ROPN1BQ9BZX4 212 aaPredicted RBP15.64■□□□□ 0.09
ACTB-204ENST00000425660 CATSPERBQ9H7T0 1116 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 CCSER2Q9H7U1 834 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 ROPN1Q9HAT0 212 aaPredicted RBP15.64■□□□□ 0.09
ACTB-204ENST00000425660 CYP4F11Q9HBI6 524 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 SAYSD1Q9NPB0 183 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 SSX2IPQ9Y2D8 614 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 ZNF840PA6NDX5 716 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 WASH4PA8MWX3 477 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 E9PAM4 449 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 TEX28O15482 410 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 MTSS1O43312 755 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 METTL18O95568 372 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 APOEP02649 317 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 SRGAP2BP0DMP2 458 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 ALDH1A3P47895 512 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 AP1B1Q10567 949 aa15.64■□□□□ 0.09
ACTB-204ENST00000425660 SEMA5AQ13591 1074 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms