RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 SHBQ15464 509 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 PKDCCQ504Y2 493 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 ADGRF1Q5T601 910 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 ATL3Q6DD88 541 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 NADSYN1Q6IA69 706 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 GATAD2AQ86YP4 633 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 CCDC150Q8NCX0 1101 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 PRICKLE1Q96MT3 831 aaPredicted RBP12.21□□□□□ -0.45
PLOD3-204ENST00000424135 BTBD1Q9H0C5 482 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 STIM2Q9P246 746 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 USP25Q9UHP3 1055 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 CFAP45Q9UL16 551 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 PLA2G4CQ9UP65 541 aa12.21□□□□□ -0.45
PLOD3-204ENST00000424135 HBS1LQ9Y450 684 aaKnown RBP12.21□□□□□ -0.45
PLOD3-204ENST00000424135 HELZ2Q9BYK8 2649 aaKnown RBP12.2□□□□□ -0.46
PLOD3-204ENST00000424135 FAM47DPA6NHR8 397 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 O00370 1275 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 TNFSF14O43557 240 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 TBL1XO60907 577 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 SIN3BO75182 1162 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 IGLV3-27P01718 113 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 CD19P15391 556 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 CTSOP43234 321 aaPredicted RBP12.2□□□□□ -0.46
PLOD3-204ENST00000424135 PMS1P54277 932 aaKnown RBP12.2□□□□□ -0.46
PLOD3-204ENST00000424135 BCAT1P54687 386 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 DAOAP59103 153 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 RPS24P62847 133 aaKnown RBP12.2□□□□□ -0.46
PLOD3-204ENST00000424135 LRMPQ12912 555 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 CUL2Q13617 745 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 KCNJ12Q14500 433 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 SMAD1Q15797 465 aaKnown RBP12.2□□□□□ -0.46
PLOD3-204ENST00000424135 SGO2Q562F6 1265 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 FSCBQ5H9T9 825 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 PIK3R6Q5UE93 754 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 PMF1Q6P1K2 205 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 KRBA2Q6ZNG9 492 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 WFIKKN2Q8TEU8 576 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 RNF139Q8WU17 664 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 KAT5Q92993 513 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 IGSF8Q969P0 613 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 MRGPRX3Q96LB0 322 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 PCED1AQ9H1Q7 454 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 LRRC4Q9HBW1 653 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 OSGEPQ9NPF4 335 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 DKK4Q9UBT3 224 aa12.2□□□□□ -0.46
PLOD3-204ENST00000424135 PLXNA2O75051 1894 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 FLNBO75369 2602 aaKnown RBP12.19□□□□□ -0.46
PLOD3-204ENST00000424135 C10orf142B7Z368 130 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 RNF225M0QZC1 329 aaPredicted RBP12.19□□□□□ -0.46
PLOD3-204ENST00000424135 PLK4O00444 970 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 MID1O15344 667 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 PCDHGA12O60330 932 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 DNTTP04053 509 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 MYL1P05976 194 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 FYNP06241 537 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 RPL13P26373 211 aaKnown RBP12.19□□□□□ -0.46
PLOD3-204ENST00000424135 CSKP41240 450 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 GRK6P43250 576 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 CCT8P50990 548 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 GALCP54803 685 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 BST2Q10589 180 aaKnown RBP12.19□□□□□ -0.46
PLOD3-204ENST00000424135 DNAJC3Q13217 504 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 SUZ12Q15022 739 aaKnown RBP12.19□□□□□ -0.46
PLOD3-204ENST00000424135 TEAD4Q15561 434 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 DCAF17Q5H9S7 520 aaPredicted RBP12.19□□□□□ -0.46
PLOD3-204ENST00000424135 KIAA0895LQ68EN5 471 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 MSANTD2Q6P1R3 559 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 NCEH1Q6PIU2 408 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 DHX40Q8IX18 779 aaKnown RBP12.19□□□□□ -0.46
PLOD3-204ENST00000424135 AHI1Q8N157 1196 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 SIX6OS1Q8N1H7 587 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 KCTD13Q8WZ19 329 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 SPATA32Q96LK8 384 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 IPO9Q96P70 1041 aaKnown RBP12.19□□□□□ -0.46
PLOD3-204ENST00000424135 RSPH9Q9H1X1 276 aaPredicted RBP12.19□□□□□ -0.46
PLOD3-204ENST00000424135 PABPC3Q9H361 631 aaKnown RBP12.19□□□□□ -0.46
PLOD3-204ENST00000424135 CAAP1Q9H8G2 361 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 XPO7Q9UIA9 1087 aaKnown RBP12.19□□□□□ -0.46
PLOD3-204ENST00000424135 COQ4Q9Y3A0 265 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 CFAP46Q8IYW2 2715 aa12.19□□□□□ -0.46
PLOD3-204ENST00000424135 A0A1B0GTQ1 180 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 A0A1W2PP55 124 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 TTC34A8MYJ7 566 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 ACSL4O60488 711 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 PRB1P04280 392 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 POLR2EP19388 210 aaKnown RBP12.18□□□□□ -0.46
PLOD3-204ENST00000424135 ITPKBP27987 946 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 PRCPP42785 496 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 METAP1P53582 386 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 PNOCQ13519 176 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 EDRF1Q3B7T1 1238 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 C9orf64Q5T6V5 341 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 TCERG1LQ5VWI1 586 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 ZNF776Q68DI1 518 aaPredicted RBP12.18□□□□□ -0.46
PLOD3-204ENST00000424135 MMAAQ8IVH4 418 aaKnown RBP12.18□□□□□ -0.46
PLOD3-204ENST00000424135 CFAP52Q8N1V2 620 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 AADATQ8N5Z0 425 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 GANCQ8TET4 914 aa12.18□□□□□ -0.46
PLOD3-204ENST00000424135 SLC35F5Q8WV83 523 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms