RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 LILRA2Q8N149 483 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 PRPF31Q8WWY3 499 aaKnown RBP21.84■■□□□ 1.09
USP48-205ENST00000421625 ZFRQ96KR1 1074 aaKnown RBP21.84■■□□□ 1.09
USP48-205ENST00000421625 OR52B2Q96RD2 323 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 MRPL4Q9BYD3 311 aaKnown RBP21.84■■□□□ 1.09
USP48-205ENST00000421625 FAM96AQ9H5X1 160 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 DMTF1Q9Y222 760 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 MGAMO43451 1857 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 A0A1B0GTW7 788 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 TNFAIP8O95379 198 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 XRCC1P18887 633 aaPredicted RBP21.84■■□□□ 1.09
USP48-205ENST00000421625 TPSB2P20231 275 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 HDAC4P56524 1084 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 TPSAB1Q15661 275 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 CCDC14Q49A88 953 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 ZNF667Q5HYK9 610 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 SNRNP25Q9BV90 132 aaKnown RBP21.84■■□□□ 1.09
USP48-205ENST00000421625 MRPL1Q9BYD6 325 aaKnown RBP21.84■■□□□ 1.09
USP48-205ENST00000421625 BCO2Q9BYV7 579 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 SIX4Q9UIU6 781 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 RIMS3Q9UJD0 308 aa21.84■■□□□ 1.09
USP48-205ENST00000421625 GNEQ9Y223 722 aaKnown RBP21.84■■□□□ 1.09
USP48-205ENST00000421625 SPATA31C2B4DYI2 1134 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 STRNO43815 780 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 PDK2Q15119 407 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 STILQ15468 1287 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 FSCBQ5H9T9 825 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 EPGNQ6UW88 154 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 NAPRTQ6XQN6 538 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 AHI1Q8N157 1196 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 GALNT4Q8N4A0 578 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 ZNF668Q96K58 619 aaPredicted RBP21.83■■□□□ 1.09
USP48-205ENST00000421625 GMLQ99445 158 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 MAGEB5Q9BZ81 275 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 ZNF696Q9H7X3 374 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 PGAP2Q9UHJ9 254 aa21.83■■□□□ 1.09
USP48-205ENST00000421625 GOLGA8QA0A0J9YX86 632 aa21.83■■□□□ 1.08
USP48-205ENST00000421625 GOLGA8OA6NCC3 632 aa21.83■■□□□ 1.08
USP48-205ENST00000421625 SPDYE16A6NNV3 312 aaPredicted RBP21.83■■□□□ 1.08
USP48-205ENST00000421625 GOLGA8NF8WBI6 632 aa21.83■■□□□ 1.08
USP48-205ENST00000421625 F7P08709 466 aaPredicted RBP21.83■■□□□ 1.08
USP48-205ENST00000421625 PRDX6P30041 224 aa21.83■■□□□ 1.08
USP48-205ENST00000421625 SLC5A2P31639 672 aa21.83■■□□□ 1.08
USP48-205ENST00000421625 SNRNP48Q6IEG0 339 aaKnown RBP21.83■■□□□ 1.08
USP48-205ENST00000421625 CMC1Q7Z7K0 106 aa21.83■■□□□ 1.08
USP48-205ENST00000421625 RNF148Q8N7C7 305 aa21.83■■□□□ 1.08
USP48-205ENST00000421625 ANKRD36BP1Q96IX9 119 aa21.83■■□□□ 1.08
USP48-205ENST00000421625 PPP1R36Q96LQ0 422 aa21.83■■□□□ 1.08
USP48-205ENST00000421625 AK5Q9Y6K8 562 aa21.83■■□□□ 1.08
USP48-205ENST00000421625 BTBD19C9JJ37 291 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 ZSCAN9O15535 394 aaPredicted RBP21.82■■□□□ 1.08
USP48-205ENST00000421625 ALDH1A2O94788 518 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 SESN2P58004 480 aaPredicted RBP21.82■■□□□ 1.08
USP48-205ENST00000421625 STEAP4Q687X5 459 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 KLC3Q6P597 504 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 NIM1KQ8IY84 436 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 TMEM192Q8IY95 271 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 CDH19Q9H159 772 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 GCATO75600 419 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 CPA3P15088 417 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 PKNOX1P55347 436 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 CXCL9Q07325 125 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 APOFQ13790 326 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 FLOT2Q14254 428 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 SNX32Q86XE0 403 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 TICAM1Q8IUC6 712 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 CDKL3Q8IVW4 592 aaPredicted RBP21.82■■□□□ 1.08
USP48-205ENST00000421625 GAB3Q8WWW8 586 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 TMEM176AQ96HP8 235 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 PGLYRP2Q96PD5 576 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 CDRT15Q96T59 188 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 GMEB1Q9Y692 573 aa21.82■■□□□ 1.08
USP48-205ENST00000421625 MYO18AQ92614 2054 aaKnown RBP21.81■■□□□ 1.08
USP48-205ENST00000421625 H3BSA7 217 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 TRPA1O75762 1119 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 CYP3A5P20815 502 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 RGS7P49802 495 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 GALK1P51570 392 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 BSPRYQ5W0U4 402 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 AMIGO2Q86SJ2 522 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 CEP70Q8NHQ1 597 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 MOCOSQ96EN8 888 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 HEXIM2Q96MH2 286 aaKnown RBP21.81■■□□□ 1.08
USP48-205ENST00000421625 ACSS2Q9NR19 701 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 MTMR10Q9NXD2 777 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 PLK2Q9NYY3 685 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 DGKIO75912 1065 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 HSPA4LO95757 839 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 PRKCBP05771 671 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 IMPDH2P12268 514 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 CYP2F1P24903 491 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 TYK2P29597 1187 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 CES3Q6UWW8 571 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 PLD6Q8N2A8 252 aaKnown RBP21.81■■□□□ 1.08
USP48-205ENST00000421625 USP13Q92995 863 aaPredicted RBP21.81■■□□□ 1.08
USP48-205ENST00000421625 CDHR1Q96JP9 859 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 PKP2Q99959 881 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 PCDHB12Q9Y5F1 795 aa21.81■■□□□ 1.08
USP48-205ENST00000421625 MGAT1P26572 445 aa21.8■■□□□ 1.08
USP48-205ENST00000421625 PIK3R1P27986 724 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms