RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 EPB41P11171 864 aaKnown RBP7.35□□□□□ -1.23
HMGN1-205ENST00000419378 HMGA1P17096 107 aaKnown RBP7.35□□□□□ -1.23
HMGN1-205ENST00000419378 CDC25CP30307 473 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 GNL1P36915 607 aaPredicted RBP7.35□□□□□ -1.23
HMGN1-205ENST00000419378 VIPR2P41587 438 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 GRIA2P42262 883 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 MAGEA11P43364 429 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 RAP1GAPP47736 663 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 CDH8P55286 799 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 UBE2HP62256 183 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 RPL10AP62906 217 aaKnown RBP7.35□□□□□ -1.23
HMGN1-205ENST00000419378 CYP4F8P98187 520 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 LRRC63Q05C16 580 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 MORC3Q14149 939 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 MAPRE1Q15691 268 aaKnown RBP7.35□□□□□ -1.23
HMGN1-205ENST00000419378 TAF12Q16514 161 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 SGSM1Q2NKQ1 1148 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 ARHGAP15Q53QZ3 475 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 MDH1BQ5I0G3 518 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 GPR158Q5T848 1215 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 SDHAF4Q5VUM1 108 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 FOXB2Q5VYV0 432 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 ANKRD40Q6AI12 368 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 ISM2Q6H9L7 571 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 SPOPLQ6IQ16 392 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 POMZP3Q6PJE2 187 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 TRIM59Q8IWR1 403 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 SCN4BQ8IWT1 228 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 ZC3H3Q8IXZ2 948 aaKnown RBP7.35□□□□□ -1.23
HMGN1-205ENST00000419378 TMEM105Q8N8V8 129 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 FLCNQ8NFG4 579 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 MYCBPAPQ8TBZ2 947 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 TAS1R2Q8TE23 839 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 BTN2A2Q8WVV5 523 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 TAF4BQ92750 862 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 PCED1BQ96HM7 432 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 GCNAQ96QF7 691 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 HDAC8Q9BY41 377 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 PLA2G2FQ9BZM2 168 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 GPR88Q9GZN0 384 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 MMRN2Q9H8L6 949 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 ZFP14Q9HCL3 533 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 ARHGEF3Q9NR81 526 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 GPATCH2Q9NW75 528 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 ZC3H7BQ9UGR2 993 aaKnown RBP7.35□□□□□ -1.23
HMGN1-205ENST00000419378 SF3B6Q9Y3B4 125 aaKnown RBP7.35□□□□□ -1.23
HMGN1-205ENST00000419378 COL4A2P08572 1712 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 OBSL1O75147 1896 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 DMDP11532 3685 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 BIN1O00499 593 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 TADA3O75528 432 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 NOL4O94818 638 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 PRAMEF12O95522 483 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 IGHA1P01876 353 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 CSH1P0DML2 217 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 CSH2P0DML3 217 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 P4HA1P13674 534 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 FOSL1P15407 271 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 PTPN1P18031 435 aaKnown RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 AOC1P19801 751 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 BDNFP23560 247 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 CCNE1P24864 410 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 HSD3B2P26439 372 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 AVPR2P30518 371 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 GTF2H1P32780 548 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 PPP1R2P41236 205 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 CTSKP43235 329 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 MXI1P50539 228 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 CACNA2D1P54289 1103 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 NOP14P78316 857 aaKnown RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 FKBP3Q00688 224 aaKnown RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 PFKPQ01813 784 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 STIM1Q13586 685 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 DCAF17Q5H9S7 520 aaPredicted RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 YOD1Q5VVQ6 348 aaPredicted RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 KRT39Q6A163 491 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 VSTM1Q6UX27 236 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 VITQ6UXI7 678 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 TMEM150AQ86TG1 271 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 B3GALNT2Q8NCR0 500 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 PRSS33Q8NF86 280 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 ENOX1Q8TC92 643 aaKnown RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 NETO1Q8TDF5 533 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 DEPDC1BQ8WUY9 529 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 RSPRY1Q96DX4 576 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 TRMT2BQ96GJ1 504 aaKnown RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 DHTKD1Q96HY7 919 aaPredicted RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 AARSD1Q9BTE6 412 aaKnown RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 IMPG2Q9BZV3 1241 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 ZNF518BQ9C0D4 1074 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 KCNH6Q9H252 994 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 TRIT1Q9H3H1 467 aaKnown RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 TBC1D17Q9HA65 648 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 TRPV4Q9HBA0 871 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 APOBEC3GQ9HC16 384 aaKnown RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 TMEM8AQ9HCN3 771 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 MAGEC2Q9UBF1 373 aaPredicted RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 HMGXB4Q9UGU5 601 aa7.34□□□□□ -1.23
HMGN1-205ENST00000419378 MAGED2Q9UNF1 606 aaPredicted RBP7.34□□□□□ -1.23
HMGN1-205ENST00000419378 GREB1Q4ZG55 1949 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms