RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 NR1H3Q13133 447 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 ZNF771Q7L3S4 317 aaPredicted RBP17.29■□□□□ 0.36
SSBP3-205ENST00000417664 CCNYQ8ND76 341 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 BCL7CQ8WUZ0 217 aaPredicted RBP17.29■□□□□ 0.36
SSBP3-205ENST00000417664 FBXO32Q969P5 355 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 VWCEQ96DN2 955 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 B3GALT6Q96L58 329 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 VAT1Q99536 393 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 CATSPERBQ9H7T0 1116 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 VPS37BQ9H9H4 285 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 XAB2Q9HCS7 855 aaKnown RBP17.29■□□□□ 0.36
SSBP3-205ENST00000417664 DONSONQ9NYP3 566 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 FNIP2Q9P278 1114 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 SLC24A2Q9UI40 661 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 ACTL7BQ9Y614 415 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.29■□□□□ 0.36
SSBP3-205ENST00000417664 MYO16Q9Y6X6 1858 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 KIAA0355O15063 1070 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 MLNP12872 115 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 PBX3P40426 434 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 MMP13P45452 471 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 GPR15P49685 360 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 GNGT1P63211 74 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 COG7P83436 770 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 DMTNQ08495 405 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 GALNT2Q10471 571 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 PSMD5Q16401 504 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 PARP6Q2NL67 630 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 BBS9Q3SYG4 887 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 MANEALQ5VSG8 457 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 RSPO2Q6UXX9 243 aaPredicted RBP17.29■□□□□ 0.36
SSBP3-205ENST00000417664 TAS1R1Q7RTX1 841 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 PALM2Q8IXS6 379 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 CCDC13Q8IYE1 715 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 ZNF276Q8N554 614 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 FBXO36Q8NEA4 188 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 SLC39A13Q96H72 371 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 ZNF558Q96NG5 402 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 CDK5RAP1Q96SZ6 601 aaKnown RBP17.29■□□□□ 0.36
SSBP3-205ENST00000417664 SEPT5Q99719 369 aaPredicted RBP17.29■□□□□ 0.36
SSBP3-205ENST00000417664 GMIPQ9P107 970 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 IGSF9Q9P2J2 1179 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 SFMBT1Q9UHJ3 866 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 CDY1Q9Y6F8 540 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 TEX264Q9Y6I9 313 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 LTBP2Q14767 1821 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 RNF103O00237 685 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 PAGE1O75459 146 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 SOD2P04179 222 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 GSTA2P09210 222 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 KPNA1P52294 538 aaPredicted RBP17.28■□□□□ 0.36
SSBP3-205ENST00000417664 USP46P62068 366 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 KLHL38Q2WGJ6 581 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 MSS51Q4VC12 460 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 SDHAF4Q5VUM1 108 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 KIAA1841Q6NSI8 718 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 C3orf62Q6ZUJ4 267 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 LRRC49Q8IUZ0 686 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 CMTR2Q8IYT2 770 aaKnown RBP17.28■□□□□ 0.36
SSBP3-205ENST00000417664 TTC9BQ8N6N2 239 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 CENPTQ96BT3 561 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 TBC1D31Q96DN5 1066 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 PAWRQ96IZ0 340 aaKnown RBP17.28■□□□□ 0.36
SSBP3-205ENST00000417664 TTLL2Q9BWV7 592 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.28■□□□□ 0.36
SSBP3-205ENST00000417664 OSER1Q9NX31 292 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 EURLQ9NYK6 297 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 STK39Q9UEW8 545 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 TRHDEQ9UKU6 1024 aa17.28■□□□□ 0.36
SSBP3-205ENST00000417664 CLUHO75153 1309 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 BAIAP3O94812 1187 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 VNN2O95498 520 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 METTL18O95568 372 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 LAG3P18627 525 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 GARSP41250 739 aaKnown RBP17.27■□□□□ 0.36
SSBP3-205ENST00000417664 MAGEA3P43357 314 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 PGFP49763 221 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 MLLT6P55198 1093 aaPredicted RBP17.27■□□□□ 0.36
SSBP3-205ENST00000417664 GPX6P59796 221 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 IFI35P80217 286 aaPredicted RBP17.27■□□□□ 0.36
SSBP3-205ENST00000417664 GAD2Q05329 585 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 DUSP4Q13115 394 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 SKIDA1Q1XH10 827 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 LRRC26Q2I0M4 334 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 TPGS2Q68CL5 300 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 PRSS55Q6UWB4 352 aaPredicted RBP17.27■□□□□ 0.36
SSBP3-205ENST00000417664 NECAB2Q7Z6G3 386 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 TADA2BQ86TJ2 420 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 TMEM199Q8N511 208 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 TAB3Q8N5C8 712 aaPredicted RBP17.27■□□□□ 0.36
SSBP3-205ENST00000417664 COLGALT1Q8NBJ5 622 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 OVCA2Q8WZ82 227 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 ARHGEF2Q92974 986 aaKnown RBP17.27■□□□□ 0.36
SSBP3-205ENST00000417664 FCRL2Q96LA5 508 aaPredicted RBP17.27■□□□□ 0.36
SSBP3-205ENST00000417664 RC3H2Q9HBD1 1191 aaKnown RBP17.27■□□□□ 0.36
SSBP3-205ENST00000417664 AFF4Q9UHB7 1163 aaKnown RBP17.27■□□□□ 0.36
SSBP3-205ENST00000417664 SLC27A5Q9Y2P5 690 aa17.27■□□□□ 0.36
SSBP3-205ENST00000417664 WDR27A2RRH5 827 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 WASH4PA8MWX3 477 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 APOEP02649 317 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms