RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 EGR3Q06889 387 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 ZNF543Q08ER8 600 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 CCDC157Q569K6 752 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 TMEM196Q5HYL7 178 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 MFSD4BQ5TF39 518 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 SFMBT2Q5VUG0 894 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 FSTL4Q6MZW2 842 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 C16orf87Q6PH81 154 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 TMCO3Q6UWJ1 677 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 DHRS13Q6UX07 377 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 LRRC31Q6UY01 552 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 RASSF3Q86WH2 238 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 KIF18BQ86Y91 864 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 FAM114A1Q8IWE2 563 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 ZC3H7AQ8IWR0 971 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 NXPE1Q8N323 547 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 PDILTQ8N807 584 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 CEP112Q8N8E3 955 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 SPATA20Q8TB22 786 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 GIMAP1Q8WWP7 306 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 E2F7Q96AV8 911 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 NAF1Q96HR8 494 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 HIC2Q96JB3 615 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 B3GALT6Q96L58 329 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 CNOT6LQ96LI5 555 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 ALS2CR12Q96Q35 445 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 SENP7Q9BQF6 1050 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 AZI2Q9H6S1 392 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 IPPKQ9H8X2 491 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 TRPV4Q9HBA0 871 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 COMMD10Q9Y6G5 202 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 ABCA2Q9BZC7 2435 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 KAT6AQ92794 2004 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 TNRC6BQ9UPQ9 1833 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 PNMA6EA0A0J9YXQ4 647 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 GSTTP1A0A1W2PQM5 241 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 ZNF197O14709 1029 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 KATNA1O75449 491 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 FSBPO95073 299 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 GNAI3P08754 354 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 MSL3P1P0C860 447 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 PDHBP11177 359 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 JUPP14923 745 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 FOSL1P15407 271 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 KCNA2P16389 499 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 FERP16591 822 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 RPL10P27635 214 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 GCKP35557 465 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 DCTP40126 519 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 MECP2P51608 486 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 SH3BGRP55822 239 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 FCHO2Q0JRZ9 810 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 EIF2B5Q13144 721 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 LAPTM5Q13571 262 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 LAMB3Q13751 1172 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 USP41Q3LFD5 358 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 TMEM177Q53S58 311 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 PRSS36Q5K4E3 855 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 NUGGCQ68CJ6 796 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 ANO7Q6IWH7 933 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 OVCH1Q7RTY7 1134 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 HAUS6Q7Z4H7 955 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 ARHGAP22Q7Z5H3 698 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 IQCA1Q86XH1 822 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 RAVER1Q8IY67 606 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 MMP21Q8N119 569 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 OR2W6PQ8NHA6 318 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 RPLP0P6Q8NHW5 317 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 B4GALNT2Q8NHY0 566 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 ZSCAN18Q8TBC5 510 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 PI4K2BQ8TCG2 481 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 KCNN1Q92952 543 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 EAF2Q96CJ1 260 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 DHTKD1Q96HY7 919 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 FNBP1Q96RU3 617 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 CLSTN3Q9BQT9 956 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 IL17RBQ9NRM6 502 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 MAP3K20Q9NYL2 800 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 GTSE1Q9NYZ3 720 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 VWA8A3KMH1 1905 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 MTCL1Q9Y4B5 1905 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 AHCTF1Q8WYP5 2266 aa5.85□□□□□ -1.47
ECHDC1-206ENST00000417628 THADAQ6YHU6 1953 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 A6NNZ2 444 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 K7ENP7 123 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 SLC27A2O14975 620 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 FLRT2O43155 660 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 AP5Z1O43299 807 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 TNFSF14O43557 240 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 DIAPH2O60879 1101 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 PPP1R11O60927 126 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 MTRF1O75570 445 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 LUC7L3O95232 432 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 EGFP01133 1207 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 VTNP04004 478 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 SLC3A2P08195 630 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 SFTPCP11686 197 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 ENDOUP21128 410 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 OAS2P29728 719 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms