RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 TNRC6BQ9UPQ9 1833 aaKnown RBP16.19■□□□□ 0.18
ITGB1-204ENST00000417122 MUC22E2RYF6 1773 aaPredicted RBP16.19■□□□□ 0.18
ITGB1-204ENST00000417122 DAB1O75553 588 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 GFPT2O94808 682 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 EPHX1P07099 455 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 MMEP08473 750 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 SLC2A3P11169 496 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 ABCB4P21439 1286 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 PRKCHP24723 683 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 CCR1P32246 355 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 CD70P32970 193 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 NOS2P35228 1153 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 NCAPHQ15003 741 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 RAP1GAP2Q684P5 730 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 MBLAC2Q68D91 279 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 KIAA1324Q6UXG2 1013 aaKnown RBP16.19■□□□□ 0.18
ITGB1-204ENST00000417122 SLC36A4Q6YBV0 504 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 CHSY1Q86X52 802 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 CCDC117Q8IWD4 279 aaPredicted RBP16.19■□□□□ 0.18
ITGB1-204ENST00000417122 LGI2Q8N0V4 545 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 CFAP52Q8N1V2 620 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 CARNMT1Q8N4J0 409 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 ZNF397Q8NF99 534 aaPredicted RBP16.19■□□□□ 0.18
ITGB1-204ENST00000417122 FIBINQ8TAL6 211 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 EPS8L1Q8TE68 723 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 CYB5D2Q8WUJ1 264 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 RNF34Q969K3 372 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 C18orf8Q96DM3 657 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 NLRC4Q9NPP4 1024 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 CYP8B1Q9UNU6 501 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 PLA2G4CQ9UP65 541 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 SIK3Q9Y2K2 1263 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 DAAM1Q9Y4D1 1078 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 CKAP5Q14008 2032 aa16.19■□□□□ 0.18
ITGB1-204ENST00000417122 IGHV1OR15-9A0A0B4J2B8 117 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 LRRC10BA6NIK2 292 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 KCNU1A8MYU2 1149 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 SLC30A4O14863 429 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 EPHB6O15197 1021 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 AP5Z1O43299 807 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 LSM8O95777 96 aaKnown RBP16.18■□□□□ 0.18
ITGB1-204ENST00000417122 ATP5BP06576 529 aaKnown RBP16.18■□□□□ 0.18
ITGB1-204ENST00000417122 HLA-EP13747 358 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 ZNF18P17022 549 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 POLR2EP19388 210 aaKnown RBP16.18■□□□□ 0.18
ITGB1-204ENST00000417122 TACR2P21452 398 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 SOX5P35711 763 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 GABRB2P47870 512 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 JAM2P57087 298 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 RPL6Q02878 288 aaKnown RBP16.18■□□□□ 0.18
ITGB1-204ENST00000417122 UBXN1Q04323 297 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 NME3Q13232 169 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 CDH18Q13634 790 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 SYCP1Q15431 976 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 FNDC3BQ53EP0 1204 aaKnown RBP16.18■□□□□ 0.18
ITGB1-204ENST00000417122 TCEAL6Q6IPX3 200 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 ARMCX6Q7L4S7 300 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 ERICH1Q86X53 443 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 ZNF677Q86XU0 584 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 AOPEPQ8N6M6 819 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 PIGKQ92643 395 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 TCEAL3Q969E4 200 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 LMLNQ96KR4 655 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 PCMTD1Q96MG8 357 aaPredicted RBP16.18■□□□□ 0.18
ITGB1-204ENST00000417122 SPAG5Q96R06 1193 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 MKRN2Q9H000 416 aaKnown RBP16.18■□□□□ 0.18
ITGB1-204ENST00000417122 NAT10Q9H0A0 1025 aaKnown RBP16.18■□□□□ 0.18
ITGB1-204ENST00000417122 HSD3B7Q9H2F3 369 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 PRDM16Q9HAZ2 1276 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 RXFP3Q9NSD7 469 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 DMXL1Q9Y485 3027 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 DCHS1Q96JQ0 3298 aa16.18■□□□□ 0.18
ITGB1-204ENST00000417122 FAM170AA1A519 330 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 LGALS16A8MUM7 142 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 F5H5T6 163 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 H0Y626 953 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 M0QYT0 321 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 LUC7L3O95232 432 aaKnown RBP16.17■□□□□ 0.18
ITGB1-204ENST00000417122 DLDP09622 509 aaKnown RBP16.17■□□□□ 0.18
ITGB1-204ENST00000417122 MATKP42679 507 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 PTGER3P43115 390 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 COPAP53621 1224 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 RNASE9P60153 205 aaKnown RBP16.17■□□□□ 0.18
ITGB1-204ENST00000417122 FOXK2Q01167 660 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 LMAN2Q12907 356 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 PTPRNQ16849 979 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 ANO6Q4KMQ2 910 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 LYSMD4Q5XG99 296 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 METTL3Q86U44 580 aaKnown RBP16.17■□□□□ 0.18
ITGB1-204ENST00000417122 TMPRSS6Q8IU80 811 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 DEFB119Q8N690 84 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 MSANTD4Q8NCY6 345 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 NEK11Q8NG66 645 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 SIPA1Q96FS4 1042 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 PRMT1Q99873 361 aaKnown RBP16.17■□□□□ 0.18
ITGB1-204ENST00000417122 TMEM245Q9H330 911 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 CD93Q9NPY3 652 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 RRN3Q9NYV6 651 aa16.17■□□□□ 0.18
ITGB1-204ENST00000417122 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.17■□□□□ 0.187e-9■□□□□ 9.6
ITGB1-204ENST00000417122 NOCTQ9UK39 431 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms