RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 ZNF366Q8N895 744 aa19.76■□□□□ 0.75
SF3A1-202ENST00000411423 TMEM35BQ8NCS4 154 aa19.76■□□□□ 0.75
SF3A1-202ENST00000411423 ZNF397Q8NF99 534 aaPredicted RBP19.76■□□□□ 0.75
SF3A1-202ENST00000411423 FAM204AQ9H8W3 233 aa19.76■□□□□ 0.75
SF3A1-202ENST00000411423 ANLNQ9NQW6 1124 aa19.76■□□□□ 0.75
SF3A1-202ENST00000411423 DDIT4Q9NX09 232 aa19.76■□□□□ 0.75
SF3A1-202ENST00000411423 PCDHGA5Q9Y5G8 931 aa19.76■□□□□ 0.75
SF3A1-202ENST00000411423 CKAP5Q14008 2032 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 PATE3B3GLJ2 98 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 I6L893 689 aaPredicted RBP19.75■□□□□ 0.75
SF3A1-202ENST00000411423 TACR2P21452 398 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 COPAP53621 1224 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 CDK17Q00537 523 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 FMO1Q01740 532 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 CIR1Q86X95 450 aaPredicted RBP19.75■□□□□ 0.75
SF3A1-202ENST00000411423 DHX40Q8IX18 779 aaKnown RBP19.75■□□□□ 0.75
SF3A1-202ENST00000411423 LGI2Q8N0V4 545 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 HJURPQ8NCD3 748 aaPredicted RBP19.75■□□□□ 0.75
SF3A1-202ENST00000411423 CPA5Q8WXQ8 436 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 MYO19Q96H55 970 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 NOX5Q96PH1 765 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 FUCA2Q9BTY2 467 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 TRIM62Q9BVG3 475 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 TMEM245Q9H330 911 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 CYP8B1Q9UNU6 501 aa19.75■□□□□ 0.75
SF3A1-202ENST00000411423 APOEP02649 317 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 SOX5P35711 763 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 GGCXP38435 758 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 DHPSP49366 369 aaPredicted RBP19.74■□□□□ 0.75
SF3A1-202ENST00000411423 IRAK1P51617 712 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 FKBP15Q5T1M5 1219 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 NAA35Q5VZE5 725 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 MBLAC2Q68D91 279 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 CHSY1Q86X52 802 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 MFN1Q8IWA4 741 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 AHI1Q8N157 1196 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 CARNMT1Q8N4J0 409 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 FIBINQ8TAL6 211 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 WFIKKN2Q8TEU8 576 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 UCMAQ8WVF2 138 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 BTN2A3PQ96KV6 586 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 NPY6RQ99463 290 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 IRX2Q9BZI1 471 aaPredicted RBP19.74■□□□□ 0.75
SF3A1-202ENST00000411423 PDCL3Q9H2J4 239 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 MTG2Q9H4K7 406 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 PIGVQ9NUD9 493 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 TMEM74BQ9NUR3 256 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.74■□□□□ 0.75
SF3A1-202ENST00000411423 CEP83Q9Y592 693 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 NUP205Q92621 2012 aa19.74■□□□□ 0.75
SF3A1-202ENST00000411423 PRR5-ARHGAP8B1AHC4 643 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 TEX33O43247 280 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 CAVIN2O95810 425 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 CYP1A1P04798 512 aaPredicted RBP19.73■□□□□ 0.75
SF3A1-202ENST00000411423 NOS2P35228 1153 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 NUMBP49757 651 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 RNASE9P60153 205 aaKnown RBP19.73■□□□□ 0.75
SF3A1-202ENST00000411423 ARHGAP8P85298 464 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 UBXN1Q04323 297 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 NME3Q13232 169 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 PUM1Q14671 1186 aaKnown RBP eCLIP19.73■□□□□ 0.753e-6■□□□□ 9.3
SF3A1-202ENST00000411423 ARTNQ5T4W7 220 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 KIAA1324Q6UXG2 1013 aaKnown RBP19.73■□□□□ 0.75
SF3A1-202ENST00000411423 C11orf74Q86VG3 221 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 SPACA7Q96KW9 195 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 PCDHB18PQ96TA0 734 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 SYNCQ9H7C4 482 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 VPS45Q9NRW7 570 aa19.73■□□□□ 0.75
SF3A1-202ENST00000411423 ATXN2Q99700 1313 aaKnown RBP19.73■□□□□ 0.75
SF3A1-202ENST00000411423 M0QYT0 321 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 NPC1O15118 1278 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 TIMM44O43615 452 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 LUC7L3O95232 432 aaKnown RBP19.72■□□□□ 0.75
SF3A1-202ENST00000411423 EPHX1P07099 455 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 FLT3P36888 993 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 MATKP42679 507 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 CTSOP43234 321 aaPredicted RBP19.72■□□□□ 0.75
SF3A1-202ENST00000411423 CDR2Q01850 454 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 CENPCQ03188 943 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 RAB6CQ53S08 254 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 SERPINA13PQ6UXR4 307 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 LPCAT2Q7L5N7 544 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 CYP2U1Q7Z449 544 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 C14orf80Q86SX3 495 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 ERICH1Q86X53 443 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 CACUL1Q86Y37 369 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 SLC41A1Q8IVJ1 513 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 APCDD1Q8J025 514 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 ATP6V0D2Q8N8Y2 350 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 IGSF8Q969P0 613 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 NT5C3BQ969T7 300 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 TTC17Q96AE7 1141 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 C18orf8Q96DM3 657 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 MRGPRX3Q96LB0 322 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 ERGIC2Q96RQ1 377 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 DDX50Q9BQ39 737 aaKnown RBP19.72■□□□□ 0.75
SF3A1-202ENST00000411423 RAB6CQ9H0N0 254 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 TMPRSS4Q9NRS4 437 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 USP36Q9P275 1121 aaKnown RBP19.72■□□□□ 0.75
SF3A1-202ENST00000411423 TMEM59LQ9UK28 342 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms