RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 FAM193AP78312 1265 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 NRG1Q02297 640 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 PRKD1Q15139 912 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 TAF12Q16514 161 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 UBAP2Q5T6F2 1119 aaKnown RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 FAM109BQ6ICB4 259 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 BZW1Q7L1Q6 419 aaKnown RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 DNAJB7Q7Z6W7 309 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 CCDC25Q86WR0 208 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 ZNF276Q8N554 614 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 TFB1MQ8WVM0 346 aaKnown RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 POF1BQ8WVV4 589 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 UBLCP1Q8WVY7 318 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 PRCCQ92733 491 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 PSMG2Q969U7 264 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 ZIM3Q96PE6 472 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 CDK5RAP1Q96SZ6 601 aaKnown RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 LGMNQ99538 433 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 ZNF334Q9HCZ1 680 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 DNAJC17Q9NVM6 304 aaKnown RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 FARP1Q9Y4F1 1045 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 C2orf71A6NGG8 1288 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 HIDE1A8MVS5 230 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 E9PAM4 449 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 COCHO43405 550 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 ADH1AP07327 375 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 HTR7P34969 479 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 PMS2P54278 862 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 MORF4L2Q15014 288 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 PDK1Q15118 436 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 MS4A13Q5J8X5 152 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 HECTD3Q5T447 861 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 ANKRD22Q5VYY1 191 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 HEATR6Q6AI08 1181 aaKnown RBP14.49□□□□□ -0.09
GPNMB-203ENST00000409458 LILRA6Q6PI73 481 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 TADA2BQ86TJ2 420 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 ATP6V0D2Q8N8Y2 350 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 CCDC110Q8TBZ0 833 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 SPPL3Q8TCT6 385 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 CPT1BQ92523 772 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 C1orf74Q96LT6 269 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 EPB41L4BQ9H329 900 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 ACBD3Q9H3P7 528 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 PRDM12Q9H4Q4 367 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 TRPM5Q9NZQ8 1165 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 PAK5Q9P286 719 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 DNMT3LQ9UJW3 386 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 RWDD3Q9Y3V2 267 aa14.49□□□□□ -0.09
GPNMB-203ENST00000409458 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.48□□□□□ -0.09
GPNMB-203ENST00000409458 C5orf67F2Z3F1 127 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 H3BQF6 201 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 PPP1R12AO14974 1030 aaPredicted RBP14.48□□□□□ -0.09
GPNMB-203ENST00000409458 FGF10O15520 208 aaPredicted RBP14.48□□□□□ -0.09
GPNMB-203ENST00000409458 SERPINB6P35237 376 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 ATP5C1P36542 298 aaKnown RBP14.48□□□□□ -0.09
GPNMB-203ENST00000409458 MLLT6P55198 1093 aaPredicted RBP14.48□□□□□ -0.09
GPNMB-203ENST00000409458 BASP1P80723 227 aaKnown RBP14.48□□□□□ -0.09
GPNMB-203ENST00000409458 RING1Q06587 406 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 CFAP58Q5T655 872 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 PDZD4Q76G19 769 aaPredicted RBP14.48□□□□□ -0.09
GPNMB-203ENST00000409458 TMEM150AQ86TG1 271 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 ZNF683Q8IZ20 524 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 IQCKQ8N0W5 287 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 ZCCHC9Q8N567 271 aaKnown RBP14.48□□□□□ -0.09
GPNMB-203ENST00000409458 HTR3CQ8WXA8 447 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 BTN2A3PQ96KV6 586 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 KLC2Q9H0B6 622 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 TLR9Q9NR96 1032 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 OGFRQ9NZT2 677 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 SHOC2Q9UQ13 582 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 PLAAQ9Y263 795 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 IRAK3Q9Y616 596 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 RAD54BQ9Y620 910 aa14.48□□□□□ -0.09
GPNMB-203ENST00000409458 TCRBV7S3A2A0A539 114 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 C2orf78A6NCI8 922 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 TMEM63AO94886 807 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 OAS1P00973 400 aaKnown RBP14.47□□□□□ -0.09
GPNMB-203ENST00000409458 TUBP50607 506 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 IRAK1P51617 712 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 KCNQ1P51787 676 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 GAD2Q05329 585 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 GALNT2Q10471 571 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 AP1B1Q10567 949 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 SLMAPQ14BN4 828 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 ALS2CLQ60I27 953 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 RAP1GAP2Q684P5 730 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 KLHDC10Q6PID8 442 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 PCGF5Q86SE9 256 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 ITIH5Q86UX2 942 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 PPIL6Q8IXY8 311 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 NAT8LQ8N9F0 302 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 DEPDC1BQ8WUY9 529 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 CELF6Q96J87 481 aaKnown RBP14.47□□□□□ -0.09
GPNMB-203ENST00000409458 EMILIN2Q9BXX0 1053 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 NACA2Q9H009 215 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 CATSPERBQ9H7T0 1116 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 IL21Q9HBE4 155 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 UXTQ9UBK9 157 aaPredicted RBP14.47□□□□□ -0.09
GPNMB-203ENST00000409458 VANGL2Q9ULK5 521 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 HBS1LQ9Y450 684 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms