RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 CUL2Q13617 745 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 GOLGA7BQ2TAP0 167 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 CBWD6Q4V339 395 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 SGO2Q562F6 1265 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 CBWD3Q5JTY5 395 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 CBWD5Q5RIA9 395 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 DCAF12L1Q5VU92 463 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 SERPINA13PQ6UXR4 307 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 BHLHA9Q7RTU4 235 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 NAXDQ8IW45 347 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 TMA16Q96EY4 203 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 CCDC34Q96HJ3 373 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 MIR1-1HGQ9H1L0 117 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 LRRC4Q9HBW1 653 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 HESX1Q9UBX0 185 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 TSPAN16Q9UKR8 245 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 KIAA1257Q9ULG3 409 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 PLA2G4CQ9UP65 541 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 COQ4Q9Y3A0 265 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 HBS1LQ9Y450 684 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 ATP6V1DQ9Y5K8 247 aa9.57□□□□□ -0.88
NIF3L1-203ENST00000409129 C3orf80F5H4A9 247 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 ATXN7O15265 892 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 BCAT2O15382 392 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 SLC16A3O15427 465 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 VDRP11473 427 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 CD19P15391 556 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 HOXD9P28356 352 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 PRCPP42785 496 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 PRSS12P56730 875 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 ZNF445P59923 1031 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 YWHAEP62258 255 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 ADIGQ0VDE8 80 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 BST2Q10589 180 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 PNOCQ13519 176 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 CAMK2GQ13555 558 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 DCAF17Q5H9S7 520 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 ADGRF1Q5T601 910 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 TCERG1LQ5VWI1 586 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 BSPRYQ5W0U4 402 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 KIAA0907Q7Z7F0 614 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 ZCCHC9Q8N567 271 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 OR2T3Q8NH03 318 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 C1orf216Q8TAB5 229 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 UBA3Q8TBC4 463 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 RNF139Q8WU17 664 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 KCTD13Q8WZ19 329 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 EDEM1Q92611 657 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 IPO9Q96P70 1041 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 PCED1AQ9H1Q7 454 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 TMEM245Q9H330 911 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 ABCC13Q9NSE7 274 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 RMND1Q9NWS8 449 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 SFMBT1Q9UHJ3 866 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 EIF2B4Q9UI10 523 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 STOML2Q9UJZ1 356 aa9.56□□□□□ -0.88
NIF3L1-203ENST00000409129 A0A087WV48 116 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 FAM149AA5PLN7 773 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 YJEFN3A6XGL0 299 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 E7ENQ6 273 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 J3QKU1 62 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 CBFA2T3O75081 653 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 LATS1O95835 1130 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 ZNF883P0CG24 379 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 SETSIPP0DME0 302 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 HLA-EP13747 358 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 HLA-FP30511 346 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 MATKP42679 507 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 FKBP3Q00688 224 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 BNC1Q01954 994 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 HLA-BQ31612 363 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 FNDC3BQ53EP0 1204 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 COBLL1Q53SF7 1204 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 ZNF658Q5TYW1 1059 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 ANKRD40Q6AI12 368 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 IL27RAQ6UWB1 636 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 CHST9Q7L1S5 443 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 GLRX5Q86SX6 157 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 ADIPOR2Q86V24 386 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 FAM124AQ86V42 546 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 CACUL1Q86Y37 369 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 ZC3H3Q8IXZ2 948 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 SIX6OS1Q8N1H7 587 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 SCML4Q8N228 414 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 UBR7Q8N806 425 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 WFIKKN2Q8TEU8 576 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 SETD7Q8WTS6 366 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 CYB5D2Q8WUJ1 264 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 TSG101Q99816 390 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 GAREM1Q9H706 876 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 IL21RQ9HBE5 538 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 CNGB3Q9NQW8 809 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 ABCB8Q9NUT2 735 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 ARMCX3Q9UH62 379 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 PCOLCE2Q9UKZ9 415 aa9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 APOBEC2Q9Y235 224 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 USP9XQ93008 2570 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-203ENST00000409129 PPP1R3GB7ZBB8 358 aa9.54□□□□□ -0.88
NIF3L1-203ENST00000409129 O00370 1275 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms