RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 DENND5BQ6ZUT9 1274 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 TTC9BQ8N6N2 239 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 COLGALT1Q8NBJ5 622 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 STKLD1Q8NE28 680 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 FBF1Q8TES7 1133 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 ACSS3Q9H6R3 686 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 IL37Q9NZH6 218 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 MICAL3Q7RTP6 2002 aa19.53■□□□□ 0.72
USP39-202ENST00000409025 MSI1O43347 362 aaKnown RBP19.52■□□□□ 0.72
USP39-202ENST00000409025 AVILO75366 819 aa19.52■□□□□ 0.72
USP39-202ENST00000409025 SPAG6O75602 509 aa19.52■□□□□ 0.72
USP39-202ENST00000409025 RTN3O95197 1032 aaPredicted RBP19.52■□□□□ 0.72
USP39-202ENST00000409025 HTR7P34969 479 aa19.52■□□□□ 0.72
USP39-202ENST00000409025 ALDH7A1P49419 539 aaKnown RBP19.52■□□□□ 0.72
USP39-202ENST00000409025 GEMIN4P57678 1058 aaKnown RBP19.52■□□□□ 0.72
USP39-202ENST00000409025 SARNPP82979 210 aaKnown RBP19.52■□□□□ 0.72
USP39-202ENST00000409025 RASA2Q15283 850 aa19.52■□□□□ 0.72
USP39-202ENST00000409025 CAND1Q86VP6 1230 aaKnown RBP19.52■□□□□ 0.72
USP39-202ENST00000409025 TMEM173Q86WV6 379 aaPredicted RBP19.52■□□□□ 0.72
USP39-202ENST00000409025 IGDCC3Q8IVU1 814 aa19.52■□□□□ 0.72
USP39-202ENST00000409025 C2orf15Q8WU43 125 aaKnown RBP19.52■□□□□ 0.72
USP39-202ENST00000409025 SIK2Q9H0K1 926 aa19.52■□□□□ 0.72
USP39-202ENST00000409025 PPANQ9NQ55 473 aaKnown RBP19.52■□□□□ 0.72
USP39-202ENST00000409025 ATP11BQ9Y2G3 1177 aa19.52■□□□□ 0.72
USP39-202ENST00000409025 ACTL7BQ9Y614 415 aa19.52■□□□□ 0.72
USP39-202ENST00000409025 BRCA2P51587 3418 aa19.52■□□□□ 0.72
USP39-202ENST00000409025 PAGE1O75459 146 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 SRGAP2BP0DMP2 458 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 YWHAQP27348 245 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 USP46P62068 366 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 PPIDQ08752 370 aaKnown RBP19.51■□□□□ 0.71
USP39-202ENST00000409025 MGAT5BQ3V5L5 792 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 MSANTD2Q6P1R3 559 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 RSPO2Q6UXX9 243 aaPredicted RBP19.51■□□□□ 0.71
USP39-202ENST00000409025 RNF19BQ6ZMZ0 732 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 TAS1R1Q7RTX1 841 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 TP53INP2Q8IXH6 220 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 NPWQ8N729 165 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 BCL7CQ8WUZ0 217 aaPredicted RBP19.51■□□□□ 0.71
USP39-202ENST00000409025 MAML1Q92585 1016 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 LRRC39Q96DD0 335 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 RABEP2Q9H5N1 569 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 XAB2Q9HCS7 855 aaKnown RBP19.51■□□□□ 0.71
USP39-202ENST00000409025 TMEM39AQ9NV64 488 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 INTS9Q9NV88 658 aaKnown RBP19.51■□□□□ 0.71
USP39-202ENST00000409025 OSER1Q9NX31 292 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 GMIPQ9P107 970 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 PSMC3IPQ9P2W1 217 aaPredicted RBP19.51■□□□□ 0.71
USP39-202ENST00000409025 NUDT5Q9UKK9 219 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 TBX21Q9UL17 535 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 SLC27A5Q9Y2P5 690 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 CEP350Q5VT06 3117 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 CDK16Q00536 496 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 WASHC5Q12768 1159 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 PARP6Q2NL67 630 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 RWDD4Q6NW29 188 aaKnown RBP19.51■□□□□ 0.71
USP39-202ENST00000409025 FBXO32Q969P5 355 aa19.51■□□□□ 0.71
USP39-202ENST00000409025 XPO6Q96QU8 1125 aaKnown RBP19.51■□□□□ 0.71
USP39-202ENST00000409025 SEPT5Q99719 369 aaPredicted RBP19.51■□□□□ 0.71
USP39-202ENST00000409025 FAM92AA1XBS5 289 aa19.5■□□□□ 0.71
USP39-202ENST00000409025 MTSS1O43312 755 aa19.5■□□□□ 0.71
USP39-202ENST00000409025 HAPLN1P10915 354 aaPredicted RBP19.5■□□□□ 0.71
USP39-202ENST00000409025 BRAFP15056 766 aa19.5■□□□□ 0.71
USP39-202ENST00000409025 GALNT2Q10471 571 aa19.5■□□□□ 0.71
USP39-202ENST00000409025 SRRM1Q8IYB3 904 aaKnown RBP19.5■□□□□ 0.71
USP39-202ENST00000409025 ZNF567Q8N184 647 aa19.5■□□□□ 0.71
USP39-202ENST00000409025 GPR152Q8TDT2 470 aa19.5■□□□□ 0.71
USP39-202ENST00000409025 DIS3LQ8TF46 1054 aaKnown RBP19.5■□□□□ 0.71
USP39-202ENST00000409025 HDAC11Q96DB2 347 aa19.5■□□□□ 0.71
USP39-202ENST00000409025 SPATA17Q96L03 361 aa19.5■□□□□ 0.71
USP39-202ENST00000409025 KCNK9Q9NPC2 374 aa19.5■□□□□ 0.71
USP39-202ENST00000409025 EIF2B3Q9NR50 452 aaKnown RBP19.5■□□□□ 0.71
USP39-202ENST00000409025 COMMD8Q9NX08 183 aa19.5■□□□□ 0.71
USP39-202ENST00000409025 TLR6Q9Y2C9 796 aa19.5■□□□□ 0.71
USP39-202ENST00000409025 GMNCA6NCL1 334 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 RASA4BC9J798 803 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 NDUFAB1O14561 156 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 RASA4O43374 803 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 SOAT2O75908 522 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 SLC2A3P11169 496 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 RFC2P35250 354 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 MAGEA3P43357 314 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 PSEN1P49768 467 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 SEC24CP53992 1094 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 RPL10AP62906 217 aaKnown RBP19.49■□□□□ 0.71
USP39-202ENST00000409025 PRSS55Q6UWB4 352 aaPredicted RBP19.49■□□□□ 0.71
USP39-202ENST00000409025 PID1Q7Z2X4 250 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 NLRP14Q86W24 1093 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 TBC1D31Q96DN5 1066 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 MRRFQ96E11 262 aaKnown RBP19.49■□□□□ 0.71
USP39-202ENST00000409025 FCRL2Q96LA5 508 aaPredicted RBP19.49■□□□□ 0.71
USP39-202ENST00000409025 CYTH2Q99418 400 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 CEP41Q9BYV8 373 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 CATSPERBQ9H7T0 1116 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 WBP1LQ9NX94 342 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 KLHL8Q9P2G9 620 aaPredicted RBP19.49■□□□□ 0.71
USP39-202ENST00000409025 IGSF9Q9P2J2 1179 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 ZC3H7BQ9UGR2 993 aaKnown RBP19.49■□□□□ 0.71
USP39-202ENST00000409025 TMEM120BA0PK00 339 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 KCNU1A8MYU2 1149 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms