RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 LMLNQ96KR4 655 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 TRIM62Q9BVG3 475 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 NUSAP1Q9BXS6 441 aaKnown RBP20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 IRX2Q9BZI1 471 aaPredicted RBP20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 ITM2CQ9NQX7 267 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 DACH1Q9UI36 760 aa20.01■□□□□ 0.79
SMARCB1-204ENST00000407422 KCNK5O95279 499 aa20■□□□□ 0.79
SMARCB1-204ENST00000407422 ENGP17813 658 aa20■□□□□ 0.79
SMARCB1-204ENST00000407422 CD6P30203 668 aa20■□□□□ 0.79
SMARCB1-204ENST00000407422 MAPK8P45983 427 aa20■□□□□ 0.79
SMARCB1-204ENST00000407422 TPMTP51580 245 aa20■□□□□ 0.79
SMARCB1-204ENST00000407422 KCNJ12Q14500 433 aa20■□□□□ 0.79
SMARCB1-204ENST00000407422 DCAF6Q58WW2 860 aa20■□□□□ 0.79
SMARCB1-204ENST00000407422 MS4A13Q5J8X5 152 aa20■□□□□ 0.79
SMARCB1-204ENST00000407422 C1orf131Q8NDD1 294 aaKnown RBP20■□□□□ 0.79
SMARCB1-204ENST00000407422 PRCCQ92733 491 aaPredicted RBP20■□□□□ 0.79
SMARCB1-204ENST00000407422 DDX50Q9BQ39 737 aaKnown RBP20■□□□□ 0.79
SMARCB1-204ENST00000407422 PLCB1Q9NQ66 1216 aa20■□□□□ 0.79
SMARCB1-204ENST00000407422 WSB2Q9NYS7 404 aaPredicted RBP20■□□□□ 0.79
SMARCB1-204ENST00000407422 PCDH15Q96QU1 1955 aa20■□□□□ 0.79
SMARCB1-204ENST00000407422 SPEGQ15772 3267 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 GRAP2O75791 330 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 DLDP09622 509 aaKnown RBP19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 HOXD12P35452 270 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 DPP6P42658 865 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 LMAN2Q12907 356 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 EIF4EBP2Q13542 120 aaPredicted RBP19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 CAMK2GQ13555 558 aaPredicted RBP19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 UAP1L1Q3KQV9 507 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 FSCBQ5H9T9 825 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 N4BP2L1Q5TBK1 243 aaPredicted RBP19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 DAB2IPQ5VWQ8 1189 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 MMS22LQ6ZRQ5 1243 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 FAM71AQ8IYT1 594 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 DEFB106AQ8N104 65 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 CARNMT1Q8N4J0 409 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 FIBINQ8TAL6 211 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 LHX5Q9H2C1 402 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 EPG5Q9HCE0 2579 aa19.99■□□□□ 0.79
SMARCB1-204ENST00000407422 PES1O00541 588 aaKnown RBP19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 APOEP02649 317 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 ERBB2P04626 1255 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 POLR2EP19388 210 aaKnown RBP19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 MAOBP27338 520 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 KRT9P35527 623 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 DUOXA1Q1HG43 343 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 RAP1GAP2Q684P5 730 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 PSAPL1Q6NUJ1 521 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 FAM183BPQ6ZVS7 135 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 LGI2Q8N0V4 545 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 OR2T3Q8NH03 318 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 GPT2Q8TD30 523 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 SLC2A13Q96QE2 648 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 GPR174Q9BXC1 333 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 CAPN10Q9HC96 672 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 INTS6Q9UL03 887 aaKnown RBP19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 SLC6A14Q9UN76 642 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 FHOD1Q9Y613 1164 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 CEP295Q9C0D2 2601 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 SYNJ2BP-COX16A0A087WUM0 186 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 GIPC1O14908 333 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 ATP5BP06576 529 aaKnown RBP19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 RAPGEF1Q13905 1077 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 DRAP1Q14919 205 aaPredicted RBP19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 PTPN20Q4JDL3 420 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 TCP11X2Q5H9J9 407 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 RGL4Q8IZJ4 473 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 CEP76Q8TAP6 659 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 BTN2A3PQ96KV6 586 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 MTG2Q9H4K7 406 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 FAM204AQ9H8W3 233 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 COX16Q9P0S2 106 aa19.98■□□□□ 0.79
SMARCB1-204ENST00000407422 PCNX2A6NKB5 2137 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 FRYQ5TBA9 3013 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 FAM170AA1A519 330 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 TYW5A2RUC4 315 aaKnown RBP19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 SERPINF2P08697 491 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 ACADMP11310 421 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 TACR2P21452 398 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 CDH18Q13634 790 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 KLHDC7AQ5VTJ3 777 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 OR6B2Q6IFH4 312 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 OLFML1Q6UWY5 402 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 C11orf57Q6ZUT1 292 aaPredicted RBP19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 CHSY1Q86X52 802 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 MYO19Q96H55 970 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 PRSS16Q9NQE7 514 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 DDIT4Q9NX09 232 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 NFE2L3Q9Y4A8 694 aa19.97■□□□□ 0.79
SMARCB1-204ENST00000407422 KNL1Q8NG31 2342 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 HSF2BPO75031 334 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 IGLV3-19P01714 112 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 GLI1P08151 1106 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 CSKP41240 450 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 NOVA1P51513 510 aaKnown RBP19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 CDK17Q00537 523 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 GFPT1Q06210 699 aaPredicted RBP19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 EFHC1Q5JVL4 640 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 SH3PXD2AQ5TCZ1 1133 aa19.96■□□□□ 0.79
SMARCB1-204ENST00000407422 FAM124AQ86V42 546 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms