RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ZMIZ2Q8NF64 920 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 NFKBIDQ8NI38 313 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 ADAMTS18Q8TE60 1221 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 NUDT16L1Q9BRJ7 211 aaKnown RBP5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 CHCHD6Q9BRQ6 235 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 AIFM2Q9BRQ8 373 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 STN1Q9H668 368 aaKnown RBP5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 RMI1Q9H9A7 625 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 ALKBH4Q9NXW9 302 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 CEP72Q9P209 647 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 ARHGAP35Q9NRY4 1499 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 RAD54L2Q9Y4B4 1467 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 ABCA10Q8WWZ4 1543 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 DNMBPQ6XZF7 1577 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 CYP3A7-CYP3A51PA0A087WV96 503 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 GOLGA6L10A0A0M3HER8 536 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 FSD2A1L4K1 749 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 PIPSLA2A3N6 862 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 WDR27A2RRH5 827 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 GAGE10A6NGK3 116 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 TMEM232C9JQI7 657 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 AP4M1O00189 453 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 TCERG1O14776 1098 aaKnown RBP5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 FIBPO43427 364 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 METTL18O95568 372 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 NDUFB7P17568 137 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 TGM1P22735 817 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 CYP3A7P24462 503 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 CTGFP29279 349 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 JAK3P52333 1124 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 TSTQ16762 297 aaKnown RBP5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 GLE1Q53GS7 698 aaKnown RBP5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 LY6G5CQ5SRR4 150 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 HAUS3Q68CZ6 603 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 KCNV1Q6PIU1 500 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 C16orf89Q6UX73 402 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 DPY19L3Q6ZPD9 716 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 TMTC3Q6ZXV5 915 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 ZNF804AQ7Z570 1209 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 R3HCC1LQ7Z5L2 792 aaKnown RBP5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 ZNF366Q8N895 744 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 ENDOVQ8N8Q3 282 aaKnown RBP5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 HAS1Q92839 578 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 MASTLQ96GX5 879 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 NEUROD6Q96NK8 337 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 HTATIP2Q9BUP3 242 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 BDH2Q9BUT1 245 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 INTS2Q9H0H0 1204 aaKnown RBP5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 PRDM13Q9H4Q3 707 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 BEX4Q9NWD9 120 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 TAS2R10Q9NYW0 307 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 ST6GALNAC2Q9UJ37 374 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 TTLL3Q9Y4R7 772 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 PCDHB2Q9Y5E7 798 aa5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 COPG1Q9Y678 874 aaKnown RBP5.22□□□□□ -1.57
HMGB3P18-201ENST00000406327 POLA1P09884 1462 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 LMTK3Q96Q04 1460 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 PI4KAP2A4QPH2 592 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 SH2D7A6NKC9 451 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 M0QZQ0 153 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 GRM8O00222 908 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 QSOX1O00391 747 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 SPTLC2O15270 562 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 CA12O43570 354 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 FOXD2O60548 495 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 USO1O60763 962 aaKnown RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 TIPRLO75663 272 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 TTLL1O95922 423 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 F9P00740 461 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 ERBB2P04626 1255 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 NR2F6P10588 404 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 EGR2P11161 476 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 ACP5P13686 325 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 CXCR5P32302 372 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 SLC8A1P32418 973 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 POLD2P49005 469 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 CCT4P50991 539 aaKnown RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 FOXL2P58012 376 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 ALKBH1Q13686 389 aaKnown RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 TXNRD1Q16881 649 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 USP39Q53GS9 565 aaKnown RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 KAZNQ674X7 775 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 KIAA0895LQ68EN5 471 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 INO80CQ6PI98 192 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 KRBA2Q6ZNG9 492 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 CHD1LQ86WJ1 897 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 C12orf76Q8N812 135 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 LSM14AQ8ND56 463 aaKnown RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 TNIP2Q8NFZ5 429 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 RFWD2Q8NHY2 731 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 IL17DQ8TAD2 202 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 RFKQ969G6 155 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 TRMT61AQ96FX7 289 aaKnown RBP5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 SNX18Q96RF0 628 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 SAP30LQ9HAJ7 183 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 USP29Q9HBJ7 922 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 TFCP2L1Q9NZI6 479 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 HCN3Q9P1Z3 774 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 POLG2Q9UHN1 485 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 CD207Q9UJ71 328 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms