RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 WDR45BQ5MNZ6 344 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 TREML2Q5T2D2 321 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 ITPRIPL1Q6GPH6 555 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 ZNF280DQ6N043 979 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 METTL25Q8N6Q8 603 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 SOCS4Q8WXH5 440 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 NELL1Q92832 810 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 GLG1Q92896 1179 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 PKNOX2Q96KN3 472 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 HAPLN3Q96S86 360 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 TRIM36Q9NQ86 728 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 ARHGEF3Q9NR81 526 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 LIN7CQ9NUP9 197 aaKnown RBP5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 TMLHEQ9NVH6 421 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 TDRD9Q8NDG6 1382 aaKnown RBP5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 WDR47O94967 919 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 EBLN1P0CF75 366 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 RPS6KB1P23443 525 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 PSMC2P35998 433 aaKnown RBP5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 TBRG1Q3YBR2 411 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 TMEM196Q5HYL7 178 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 ZNF484Q5JVG2 852 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 FAM90A2PQ658T7 463 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 ANKRD16Q6P6B7 361 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 CLEC9AQ6UXN8 241 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 IZUMO1Q8IYV9 350 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 C1orf131Q8NDD1 294 aaKnown RBP5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 SLC2A12Q8TD20 617 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 TBC1D22AQ8WUA7 517 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 OSCP1Q8WVF1 389 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 C17orf80Q9BSJ5 609 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 THAP7Q9BT49 309 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 ACAD9Q9H845 621 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 KCNK9Q9NPC2 374 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 SMYD2Q9NRG4 433 aa5.48□□□□□ -1.53
HMGB1P13-201ENST00000406019 A1L4Q6 167 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 ONECUT2O95948 504 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 FESP07332 822 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 ABCD3P28288 659 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 CD38P28907 300 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 PBX1P40424 430 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 KRT32Q14532 448 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 MEA1Q16626 185 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 TSTQ16762 297 aaKnown RBP5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 PLAC9Q5JTB6 97 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 AARS2Q5JTZ9 985 aaKnown RBP5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 AKNAD1Q5T1N1 836 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 NAA35Q5VZE5 725 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 FAM205BPQ63HN1 556 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 FSTL5Q8N475 847 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 GALNT4Q8N4A0 578 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 SLC22A17Q8WUG5 538 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 OVCA2Q8WZ82 227 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 TBC1D5Q92609 795 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 RNF125Q96EQ8 232 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 FSD1LQ9BXM9 530 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 DUSP22Q9NRW4 184 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 ORC3Q9UBD5 711 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 STEAP1Q9UHE8 339 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 HSF4Q9ULV5 492 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 DRG1Q9Y295 367 aaKnown RBP5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 CNPY2Q9Y2B0 182 aa5.47□□□□□ -1.53
HMGB1P13-201ENST00000406019 FSD2A1L4K1 749 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 PI4KAP2A4QPH2 592 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 KLK10O43240 276 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 ZBED4O75132 1171 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 HEXIM1O94992 359 aaKnown RBP5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 NHLRC4P0CG21 123 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 CTGFP29279 349 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 CLNS1AP54105 237 aaKnown RBP5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 NAP1L1P55209 391 aaKnown RBP5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 FAM3BP58499 235 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 GALNT2Q10471 571 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 PDCLQ13371 301 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 ERV3-1Q14264 604 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 KCNJ12Q14500 433 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 CYP1B1Q16678 543 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 LY6KQ17RY6 165 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 PRICKLE4Q2TBC4 344 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 AASDHQ4L235 1098 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 DEPDC1Q5TB30 811 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 HAUS3Q68CZ6 603 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 SLC9A4Q6AI14 798 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 FCRLBQ6BAA4 426 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 LRRC8DQ7L1W4 858 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 WDR53Q7Z5U6 358 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 SRRM1Q8IYB3 904 aaKnown RBP5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 C11orf44Q8N8P7 122 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 RP9Q8TA86 221 aaKnown RBP5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 R3HDM4Q96D70 268 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 RSPRY1Q96DX4 576 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 FUZQ9BT04 418 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 PHF7Q9BWX1 381 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 CCDC134Q9H6E4 229 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 PLEKHA2Q9HB19 425 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 WNT6Q9Y6F9 365 aa5.46□□□□□ -1.54
HMGB1P13-201ENST00000406019 M0QYT0 321 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 M0QZQ0 153 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 SPTLC2O15270 562 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 SEPT4O43236 478 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms