RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	NINJ1	Q92982	152 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PGLYRP2	Q96PD5	576 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	KCNJ15	Q99712	375 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CXCL16	Q9H2A7	254 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ARRDC1-AS1	Q9H2J1	176 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	BHMT2	Q9H2M3	363 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	KMT5A	Q9NQR1	393 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	VPS45	Q9NRW7	570 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CEP72	Q9P209	647 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ANKFY1	Q9P2R3	1169 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PLAA	Q9Y263	795 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ZFHX4	Q86UP3	3567 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	HGS	O14964	777 aa	Predicted RBP	7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	GSTA4	O15217	222 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MOSPD3	O75425	235 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TOM1L1	O75674	476 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	RHOBTB1	O94844	696 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CLSTN1	O94985	981 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	OAZ2	O95190	189 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PAX3	P23760	479 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	IGFBP6	P24592	240 aa	Predicted RBP	7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CDC25C	P30307	473 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	VIPR1	P32241	457 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MCM2	P49736	904 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	NOVA1	P51513	510 aa	Known RBP	7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	NOLC1	Q14978	699 aa	Known RBP eCLIP	7.28	□□□□□ -1.24	4e-8	■□□□□ 10.1
CEACAM1-208	ENST00000403461	KARS	Q15046	597 aa	Known RBP	7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PON2	Q15165	354 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ITPRIPL2	Q3MIP1	535 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	GPR158	Q5T848	1215 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ALKAL1	Q6UXT8	129 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	DSTYK	Q6XUX3	929 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	C11orf74	Q86VG3	221 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ARID3B	Q8IVW6	561 aa	Predicted RBP	7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	BEST2	Q8NFU1	509 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CCDC26	Q8TAB7	109 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TTC8	Q8TAM2	541 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	BPIFB1	Q8TDL5	484 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	GTF3C6	Q969F1	213 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	FBXW5	Q969U6	566 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	C18orf25	Q96B23	403 aa	Predicted RBP	7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ACO2	Q99798	780 aa	Known RBP	7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TIPIN	Q9BVW5	301 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TARS2	Q9BW92	718 aa	Known RBP	7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	C17orf75	Q9HAS0	396 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PLEKHA5	Q9HAU0	1116 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SLC6A20	Q9NP91	592 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	INTS7	Q9NVH2	962 aa	Known RBP	7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	LRWD1	Q9UFC0	647 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	NOL7	Q9UMY1	257 aa	Known RBP	7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	DNM3	Q9UQ16	869 aa		7.28	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SPTBN2	O15020	2390 aa		7.27	□□□□□ -1.24
CEACAM1-208	ENST00000403461	DBX1	A6NMT0	343 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461		H0YCG3	227 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461		M0QZQ0	153 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	DNAJC8	O75937	253 aa	Predicted RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	KCNK5	O95279	499 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CTDNEP1	O95476	244 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ASL	P04424	464 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	EDN1	P05305	212 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PROS1	P07225	676 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ODC1	P11926	461 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	FDPS	P14324	419 aa	Known RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TYMP	P19971	482 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	DDX6	P26196	483 aa	Known RBP eCLIP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	GABRR2	P28476	465 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	AVPR1A	P37288	418 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MPL	P40238	635 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	NPTX2	P47972	431 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TRAPPC10	P48553	1259 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TUFM	P49411	452 aa	Known RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SRSF3	P84103	164 aa	Known RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	BFSP1	Q12934	665 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	GPR17	Q13304	367 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MYBPC2	Q14324	1141 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SF3A2	Q15428	464 aa	Known RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	KYAT1	Q16773	422 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	C21orf62-AS1	Q17RA5	79 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	FBXO43	Q4G163	708 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	EMC4	Q5J8M3	183 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	DAB2IP	Q5VWQ8	1189 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	KRT79	Q5XKE5	535 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	STEAP3	Q658P3	488 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CC2D1A	Q6P1N0	951 aa	Predicted RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TMC6	Q7Z403	805 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CAMKK1	Q8N5S9	505 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TSPAN17	Q96FV3	270 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	BICD1	Q96G01	975 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ZMAT2	Q96NC0	199 aa	Known RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TMEM209	Q96SK2	561 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SEPT5	Q99719	369 aa	Predicted RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	LSM14B	Q9BX40	385 aa	Known RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TMEM60	Q9H2L4	133 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TASP1	Q9H6P5	420 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PTPRH	Q9HD43	1115 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	DDX19A	Q9NUU7	478 aa	Known RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SIRT5	Q9NXA8	310 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	GTSE1	Q9NYZ3	720 aa		7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms