RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PIK3R2O00459 728 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 CCNT2O60583 730 aaKnown RBP20.41■□□□□ 0.86
CCDC47-202ENST00000403162 MAP3K6O95382 1288 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 CYBAP13498 195 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 SEMA5AQ13591 1074 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 EFHC1Q5JVL4 640 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 TLK2Q86UE8 772 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 S100A14Q9HCY8 104 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 ZDHHC7Q9NXF8 308 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 EMCNQ9ULC0 261 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 CASP8AP2Q9UKL3 1982 aa20.41■□□□□ 0.86
CCDC47-202ENST00000403162 GLRA3O75311 464 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 ALDH1A2O94788 518 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 BAG2O95816 211 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 TOP3BO95985 862 aaKnown RBP20.4■□□□□ 0.86
CCDC47-202ENST00000403162 STAG3L1P0CL83 205 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 FGF3P11487 239 aaPredicted RBP20.4■□□□□ 0.86
CCDC47-202ENST00000403162 AKR1A1P14550 325 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 RAB27AP51159 221 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 NDST1P52848 882 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 OLFML1Q6UWY5 402 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 DPH6Q7L8W6 267 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 CCNJLQ8IV13 435 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 HPDLQ96IR7 371 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 SMARCAD1Q9H4L7 1026 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 FAM96AQ9H5X1 160 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 DNAJC16Q9Y2G8 782 aa20.4■□□□□ 0.86
CCDC47-202ENST00000403162 MEI4A8MW99 385 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 PDE1BQ01064 536 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 CACNB2Q08289 660 aaPredicted RBP20.39■□□□□ 0.86
CCDC47-202ENST00000403162 STILQ15468 1287 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 PLPPR4Q7Z2D5 763 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 ARHGAP18Q8N392 663 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 TTC39CQ8N584 583 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 GSTCDQ8NEC7 633 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 APOL6Q9BWW8 343 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 TRIM4Q9C037 500 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 ASB7Q9H672 318 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 MINDY3Q9H8M7 445 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 IL1RAPL1Q9NZN1 696 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 ITGA11Q9UKX5 1188 aa20.39■□□□□ 0.86
CCDC47-202ENST00000403162 APOBEC2Q9Y235 224 aaKnown RBP20.39■□□□□ 0.86
CCDC47-202ENST00000403162 ITM2AO43736 263 aa20.39■□□□□ 0.85
CCDC47-202ENST00000403162 USP1O94782 785 aa20.39■□□□□ 0.85
CCDC47-202ENST00000403162 LGALS2P05162 132 aa20.39■□□□□ 0.85
CCDC47-202ENST00000403162 MYL4P12829 197 aa20.39■□□□□ 0.85
CCDC47-202ENST00000403162 CYP2F1P24903 491 aa20.39■□□□□ 0.85
CCDC47-202ENST00000403162 SDC4P31431 198 aa20.39■□□□□ 0.85
CCDC47-202ENST00000403162 SLC1A6P48664 564 aa20.39■□□□□ 0.85
CCDC47-202ENST00000403162 NIPAL4Q0D2K0 466 aa20.39■□□□□ 0.85
CCDC47-202ENST00000403162 DHDDSQ86SQ9 333 aa20.39■□□□□ 0.85
CCDC47-202ENST00000403162 SLC25A41Q8N5S1 370 aa20.39■□□□□ 0.85
CCDC47-202ENST00000403162 ZNF668Q96K58 619 aaPredicted RBP20.39■□□□□ 0.85
CCDC47-202ENST00000403162 QKIQ96PU8 341 aaKnown RBP eCLIP20.39■□□□□ 0.851e-9■■■■■ 189.5
CCDC47-202ENST00000403162 WBP1LQ9NX94 342 aa20.39■□□□□ 0.85
CCDC47-202ENST00000403162 PLIN3O60664 434 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 GJB1P08034 283 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 MMP3P08254 477 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 ZNF286BP0CG31 522 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 ZFXP17010 805 aaPredicted RBP20.38■□□□□ 0.85
CCDC47-202ENST00000403162 DESP17661 470 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 NR2C2P49116 596 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 BTKQ06187 659 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 N4BP2L1Q5TBK1 243 aaPredicted RBP20.38■□□□□ 0.85
CCDC47-202ENST00000403162 RAPH1Q70E73 1250 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 AZIN2Q96A70 460 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 TUBGCP5Q96RT8 1024 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 AP5M1Q9H0R1 490 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 DNAJC28Q9NX36 388 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 CPSF2Q9P2I0 782 aaKnown RBP20.38■□□□□ 0.85
CCDC47-202ENST00000403162 LYPLA1O75608 230 aaPredicted RBP20.38■□□□□ 0.85
CCDC47-202ENST00000403162 ALDOAP04075 364 aaKnown RBP20.38■□□□□ 0.85
CCDC47-202ENST00000403162 SERPINE1P05121 402 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 MCF2P10911 925 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 MLNP12872 115 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 PRKAR2AP13861 404 aaKnown RBP20.38■□□□□ 0.85
CCDC47-202ENST00000403162 ALOX15P16050 662 aaPredicted RBP20.38■□□□□ 0.85
CCDC47-202ENST00000403162 COPAP53621 1224 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 RPL10AP62906 217 aaKnown RBP20.38■□□□□ 0.85
CCDC47-202ENST00000403162 SLC25A3Q00325 362 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 SLC6A3Q01959 620 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 DGKDQ16760 1214 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 PGM2L1Q6PCE3 622 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 ACAD11Q709F0 780 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 PDSS2Q86YH6 399 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 LRRN4Q8WUT4 740 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 JADE3Q92613 823 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 KHSRPQ92945 711 aaKnown RBP eCLIP20.38■□□□□ 0.85
CCDC47-202ENST00000403162 NT5C1AQ9BXI3 368 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 NFKBIZQ9BYH8 718 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 TRIM17Q9Y577 477 aa20.38■□□□□ 0.85
CCDC47-202ENST00000403162 ANKRD33BA6NCL7 494 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 SIN3BO75182 1162 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 STAU1O95793 577 aaKnown RBP20.37■□□□□ 0.85
CCDC47-202ENST00000403162 IQCF3P0C7M6 154 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 GRIA1P42261 906 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 RGS7P49802 495 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 ERFP50548 548 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 POLE2P56282 527 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 HDAC4P56524 1084 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms