RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PDCD2Q16342 344 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 CES4AQ5XG92 561 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 PACS1Q6VY07 963 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 PIP4K2CQ8TBX8 421 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 PIWIL2Q8TC59 973 aaKnown RBP13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 EXT2Q93063 718 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 PTCD3Q96EY7 689 aaKnown RBP13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 THAP1Q9NVV9 213 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC25A27O95847 323 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 POLBP06746 335 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 CPA3P15088 417 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 VAV1P15498 845 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 COPAP53621 1224 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 TPI1P60174 286 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 LAMC2Q13753 1193 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 PDE1CQ14123 709 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 SYPL2Q5VXT5 272 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 MTHFD1LQ6UB35 978 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 ERO1BQ86YB8 467 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 HPS6Q86YV9 775 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 MAB21L3Q8N8X9 362 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 RNF139Q8WU17 664 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 KPNA7A9QM74 516 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 SMAPO00193 183 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 ITGA2BP08514 1039 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 PKNOX1P55347 436 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 ACAP1Q15027 740 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 SPDYAQ5MJ70 313 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 HFE2Q6ZVN8 426 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 ZNF276Q8N554 614 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 OMDQ99983 421 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 CYLDQ9NQC7 956 aa13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 FNDC3AQ9Y2H6 1198 aaKnown RBP13.01□□□□□ -0.33
PPP4R1-202ENST00000400555 ETS2P15036 469 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 ANPEPP15144 967 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 IGFBP6P24592 240 aaPredicted RBP13□□□□□ -0.33
PPP4R1-202ENST00000400555 MRPS35P82673 323 aaKnown RBP13□□□□□ -0.33
PPP4R1-202ENST00000400555 ZNF484Q5JVG2 852 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 PDPK2PQ6A1A2 396 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 GALNT4Q8N4A0 578 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 SNX31Q8N9S9 440 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 MCUQ8NE86 351 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 FAXDC2Q96IV6 333 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 PCDHA11Q9Y5I1 949 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 ASB14A6NK59 587 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 SOCS7O14512 581 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 HNRNPCL1O60812 293 aaKnown RBP13□□□□□ -0.33
PPP4R1-202ENST00000400555 MYL3P08590 195 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 USP17L7P0C7H9 530 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 MX2P20592 715 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 SERPINB9P50453 376 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 NUDT2P50583 147 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 TKTL1P51854 596 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC18A1P54219 525 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 IRF9Q00978 393 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 ENPEPQ07075 957 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 BST2Q10589 180 aaKnown RBP13□□□□□ -0.33
PPP4R1-202ENST00000400555 PCSK7Q16549 785 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 WSCD1Q658N2 575 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 ANKRD13AQ8IZ07 590 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 RYBPQ8N488 228 aaPredicted RBP13□□□□□ -0.33
PPP4R1-202ENST00000400555 IPMKQ8NFU5 416 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 ZNF398Q8TD17 642 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 SREK1Q8WXA9 508 aaKnown RBP13□□□□□ -0.33
PPP4R1-202ENST00000400555 ZNF333Q96JL9 665 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 TRIM4Q9C037 500 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 VPS33BQ9H267 617 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 A0A0A0MRY4 1105 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 FZD9O00144 591 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 WFS1O76024 890 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 LINGO3P0C6S8 592 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 PROZP22891 400 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 USP10Q14694 798 aaKnown RBP13□□□□□ -0.33
PPP4R1-202ENST00000400555 POU6F1Q14863 301 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 GEN1Q17RS7 908 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 LAYNQ6UX15 382 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 PTAR1Q7Z6K3 402 aaPredicted RBP13□□□□□ -0.33
PPP4R1-202ENST00000400555 CHSY1Q86X52 802 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 TMA16Q96EY4 203 aaKnown RBP13□□□□□ -0.33
PPP4R1-202ENST00000400555 SPATA13Q96N96 652 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 PANX3Q96QZ0 392 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 APBA2Q99767 749 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 DHRS4Q9BTZ2 278 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 NUF2Q9BZD4 464 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 CYP4F12Q9HCS2 524 aa13□□□□□ -0.33
PPP4R1-202ENST00000400555 A0A096LPK6 155 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 TRDMT1O14717 391 aaKnown RBP12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 PMPCBO75439 489 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 ZFXP17010 805 aaPredicted RBP12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 EPHA3P29320 983 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 BCAT1P54687 386 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 CYP4V2Q6ZWL3 525 aaPredicted RBP12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 KCNK16Q96T55 309 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 ZNF184Q99676 751 aaPredicted RBP12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 ARHGEF4Q9NR80 690 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 SOX13Q9UN79 622 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 C2CD2Q9Y426 696 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 SLC4A1P02730 911 aa12.99□□□□□ -0.33
PPP4R1-202ENST00000400555 AMHP03971 560 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms