RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 DENND5BQ6ZUT9 1274 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 EFL1Q7Z2Z2 1120 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 YTHDF3Q7Z739 585 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 FAM20CQ8IXL6 584 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 FAM9CQ8IZT9 166 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 DTX3LQ8TDB6 740 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 P2RX7Q99572 595 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 RMND5AQ9H871 391 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 POLMQ9NP87 494 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 CDY2AQ9Y6F7 541 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 ZCCHC11Q5TAX3 1644 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 FAM25EA8MYX2 175 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 GUCY1B2O75343 617 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 INSRRP14616 1297 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 AASDHQ4L235 1098 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 MAGEC3Q8TD91 643 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 WNK4Q96J92 1243 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 CNBD2Q96M20 576 aa11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 DDX47Q9H0S4 455 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-216ENST00000399638 MAGEC1O60732 1142 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 ERMARDQ5T6L9 678 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 SHDQ96IW2 340 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 LRRC4BQ9NT99 713 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 ADSLP30566 484 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 PKN2Q16513 984 aaKnown RBP11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 ZNF557Q8N988 423 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 SLAIN1Q8ND83 568 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 ACOX2Q99424 681 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 REEP2Q9BRK0 252 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 CBWD1Q9BRT8 395 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 CHMP2BQ9UQN3 213 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 DNAJC16Q9Y2G8 782 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 PTPRUQ92729 1446 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 ZBTB22O15209 634 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 COPZ1P61923 177 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 TMC5Q6UXY8 1006 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 NEK10Q6ZWH5 1172 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 ZNF669Q96BR6 464 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 THUMPD3Q9BV44 507 aaKnown RBP11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 SIRPGQ9P1W8 387 aa11.21□□□□□ -0.61
CACNA1C-216ENST00000399638 GAKO14976 1311 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 MTSS1O43312 755 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 TBL1XO60907 577 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 IGFALSP35858 605 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 PSMD8P48556 350 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 CLK1P49759 484 aaKnown RBP11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 CCNG1P51959 295 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 VGLL4Q14135 290 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 RASGRP3Q8IV61 690 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 SGF29Q96ES7 293 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 ECSITQ9BQ95 431 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 OSBPL2Q9H1P3 480 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 PXMP2Q9NR77 195 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 ESYT3A0FGR9 886 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 ACRP10323 421 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 TYMPP19971 482 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 POU1F1P28069 291 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 HNRNPH1P31943 449 aaKnown RBP11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 NUDT2P50583 147 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 NUP107P57740 925 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 ALX1Q15699 326 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 PHF19Q5T6S3 580 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 SLFN11Q7Z7L1 901 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 CBWD2Q8IUF1 395 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 ADGRG2Q8IZP9 1017 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 ING5Q8WYH8 240 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 C11orf49Q9H6J7 331 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 AAR2Q9Y312 384 aaKnown RBP11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 ALG6Q9Y672 507 aa11.21□□□□□ -0.62
CACNA1C-216ENST00000399638 TTC26A0AVF1 554 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 ENO1P06733 434 aaKnown RBP11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 FLT3LGP49771 235 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 SP2Q02086 613 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 PPATQ06203 517 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 RABL6Q3YEC7 729 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 KLHL35Q6PF15 583 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 SLC30A9Q6PML9 568 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 C16orf86Q6ZW13 317 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 SGMS1Q86VZ5 419 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 RBBP8Q99708 897 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 APBA2Q99767 749 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 TRBV23OR9-2A0A075B6M9 112 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 GJB1P08034 283 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 GSSP48637 474 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 BCAT1P54687 386 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 ZNF618Q5T7W0 954 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 GPR158Q5T848 1215 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 AGBL2Q5U5Z8 902 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 IQSEC1Q6DN90 963 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 OR8D1Q8WZ84 308 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 FTHL17Q9BXU8 183 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 PIF1Q9H611 641 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 CLIC5Q9NZA1 410 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 SF3B1O75533 1304 aaKnown RBP eCLIP11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 CPED1A4D0V7 1026 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 NT5C1B-RDH14C9J2C7 533 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms