RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 GTPBP1O00178 669 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 IDH3BO43837 385 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 HMGCRP04035 888 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 MAPK1P28482 360 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 PPM1AP35813 382 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 DGKEP52429 567 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 KLC1Q07866 573 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 CCNG2Q16589 344 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 TRIM16LQ309B1 348 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 FBXL16Q8N461 479 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 TMEM117Q9H0C3 514 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 PRKAG3Q9UGI9 489 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 VWDEQ8N2E2 1590 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 ACAT1P24752 427 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 NR1I3Q14994 352 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 ARMC4Q5T2S8 1044 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 KLHL17Q6TDP4 642 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 PRUNE1Q86TP1 453 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 KCNK16Q96T55 309 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 NIF3L1Q9GZT8 377 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 TMCC3Q9ULS5 477 aa11.23□□□□□ -0.61
CACNA1C-210ENST00000399606 ZC3H13Q5T200 1668 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 H3BM21 787 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 CCNB2O95067 398 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 IRAK1P51617 712 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 C4orf46Q504U0 113 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 XRRA1Q6P2D8 792 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 USP45Q70EL2 814 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 ARMCX6Q7L4S7 300 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 ISM1B1AKI9 464 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 CACNB4O00305 520 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 NCK2O43639 380 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 HDCP19113 662 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 PPP2R1BP30154 601 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 CASP6P55212 293 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 ORC2Q13416 577 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 XKR4Q5GH76 650 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 ARMCX4Q5H9R4 360 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 PROSER1Q86XN7 944 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 MTMR12Q9C0I1 747 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 TRABDQ9H4I3 376 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 POLR1BQ9H9Y6 1135 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 ARL2BPQ9Y2Y0 163 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 PDE2AO00408 941 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 SH3BGRLO75368 114 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 FSBPO95073 299 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 HSMCR30P0CW71 290 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 NCK1P16333 377 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 PRLRP16471 622 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 TLX1P31314 330 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 TKTL1P51854 596 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 ITPK1Q13572 414 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 REM2Q8IYK8 340 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 MICU2Q8IYU8 434 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 KIRREL3Q8IZU9 778 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 ACER1Q8TDN7 264 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 CASP10Q92851 521 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 CYFIP2Q96F07 1278 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 LRRC46Q96FV0 321 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 SYT15Q9BQS2 421 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 FICDQ9BVA6 458 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 VTA1Q9NP79 307 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 SH3BP4Q9P0V3 963 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 RWDD3Q9Y3V2 267 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 CCNT2O60583 730 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 CAMTA2O94983 1202 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 TRAP1Q12931 704 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 SMU1Q2TAY7 513 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 TAF2Q6P1X5 1199 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 SLC30A9Q6PML9 568 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 DENND5BQ6ZUT9 1274 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 EFL1Q7Z2Z2 1120 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 YTHDF3Q7Z739 585 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 FAM20CQ8IXL6 584 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 FAM9CQ8IZT9 166 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 P2RX7Q99572 595 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 RMND5AQ9H871 391 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 POLMQ9NP87 494 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 CDY2AQ9Y6F7 541 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 ZCCHC11Q5TAX3 1644 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 FAM25EA8MYX2 175 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 GUCY1B2O75343 617 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 INSRRP14616 1297 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 STX3Q13277 289 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 AGGF1Q8N302 714 aaeCLIP11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 MAGEC3Q8TD91 643 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 WNK4Q96J92 1243 aa11.22□□□□□ -0.61
CACNA1C-210ENST00000399606 MAGEC1O60732 1142 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 DHX34Q14147 1143 aaKnown RBP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 ERMARDQ5T6L9 678 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 SHDQ96IW2 340 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 LRRC4BQ9NT99 713 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 KLHL2O95198 593 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 ALBP02768 609 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 ADSLP30566 484 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 PKN2Q16513 984 aaKnown RBP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 ZNF557Q8N988 423 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 SLAIN1Q8ND83 568 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 C19orf18Q8NEA5 215 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 ACOX2Q99424 681 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms