RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 CPA6Q8N4T0 437 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 LRRC57Q8N9N7 239 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 TTC8Q8TAM2 541 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 DEPDC1BQ8WUY9 529 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 OSCP1Q8WVF1 389 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 UBE2Q2Q8WVN8 375 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 TEKT4Q8WW24 435 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 ATP2A3Q93084 1043 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 NXPE3Q969Y0 559 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 AZIN2Q96A70 460 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 NTAN1Q96AB6 310 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 OTUB2Q96DC9 234 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 SLC39A13Q96H72 371 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 RBM41Q96IZ5 413 aaKnown RBP9.23□□□□□ -0.93
BRCC3-206ENST00000399042 ZFYVE19Q96K21 471 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 ZFRQ96KR1 1074 aaKnown RBP9.23□□□□□ -0.93
BRCC3-206ENST00000399042 SNRNP25Q9BV90 132 aaKnown RBP9.23□□□□□ -0.93
BRCC3-206ENST00000399042 TRPV4Q9HBA0 871 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 TMPRSS4Q9NRS4 437 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 ARHGEF38Q9NXL2 777 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 OBP2AQ9NY56 170 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 DONSONQ9NYP3 566 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 CALCOCO1Q9P1Z2 691 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 DNAI1Q9UI46 699 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 XPO7Q9UIA9 1087 aaKnown RBP9.23□□□□□ -0.93
BRCC3-206ENST00000399042 VANGL2Q9ULK5 521 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 PACSIN2Q9UNF0 486 aaPredicted RBP9.23□□□□□ -0.93
BRCC3-206ENST00000399042 SNX10Q9Y5X0 201 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 HS3ST4Q9Y661 456 aa9.23□□□□□ -0.93
BRCC3-206ENST00000399042 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-206ENST00000399042 E9PAM4 449 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 NEDD8-MDP1E9PL57 170 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 H0Y626 953 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 KIF2AO00139 706 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-206ENST00000399042 TBL1XO60907 577 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 IGLV3-27P01718 113 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 KLKB1P03952 638 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 TCF4P15884 667 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 CTNNA2P26232 953 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 IL1R2P27930 398 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 EPHB2P29323 1055 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 CTNNA1P35221 906 aaKnown RBP9.22□□□□□ -0.93
BRCC3-206ENST00000399042 MLLT6P55198 1093 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-206ENST00000399042 AMPD2Q01433 879 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 SLC25A11Q02978 314 aaKnown RBP9.22□□□□□ -0.93
BRCC3-206ENST00000399042 USP4Q13107 963 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 ZNF177Q13360 481 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-206ENST00000399042 CDH18Q13634 790 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 HTR4Q13639 388 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 PDK2Q15119 407 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 ATP13A4Q4VNC1 1196 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 MPPE1Q53F39 396 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 MS4A13Q5J8X5 152 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 KAZNQ674X7 775 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 TRIM68Q6AZZ1 485 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 VITQ6UXI7 678 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 SYT10Q6XYQ8 523 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 NT5DC3Q86UY8 548 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 RFX6Q8HWS3 928 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 ADHFE1Q8IWW8 467 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 ZDHHC14Q8IZN3 488 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 CFAP52Q8N1V2 620 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 PYROXD2Q8N2H3 581 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 CARNMT1Q8N4J0 409 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 ARFGAP1Q8N6T3 406 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 HJURPQ8NCD3 748 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-206ENST00000399042 ATXN2LQ8WWM7 1075 aaKnown RBP9.22□□□□□ -0.93
BRCC3-206ENST00000399042 RSAD2Q8WXG1 361 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 FGF14Q92915 247 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 IRF7Q92985 503 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 WBP2Q969T9 261 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 TBC1D31Q96DN5 1066 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 C1orf74Q96LT6 269 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 PEBP4Q96S96 227 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 PSMB7Q99436 277 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 NAPGQ99747 312 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-206ENST00000399042 BBS2Q9BXC9 721 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 OSBPL2Q9H1P3 480 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 LINC00597Q9H2U6 94 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 EBF3Q9H4W6 596 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 CATSPERBQ9H7T0 1116 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 KCNK12Q9HB15 430 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 KCND1Q9NSA2 647 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 IGSF9Q9P2J2 1179 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 PCDHA3Q9Y5H8 950 aa9.22□□□□□ -0.93
BRCC3-206ENST00000399042 MTCL1Q9Y4B5 1905 aaKnown RBP9.22□□□□□ -0.93
BRCC3-206ENST00000399042 SZT2Q5T011 3432 aa9.21□□□□□ -0.93
BRCC3-206ENST00000399042 TK2O00142 265 aa9.21□□□□□ -0.94
BRCC3-206ENST00000399042 CHADO15335 359 aa9.21□□□□□ -0.94
BRCC3-206ENST00000399042 CEP104O60308 925 aa9.21□□□□□ -0.94
BRCC3-206ENST00000399042 TUBB4AP04350 444 aa9.21□□□□□ -0.94
BRCC3-206ENST00000399042 ASGR2P07307 311 aa9.21□□□□□ -0.94
BRCC3-206ENST00000399042 KDELR1P24390 212 aa9.21□□□□□ -0.94
BRCC3-206ENST00000399042 L1CAMP32004 1257 aa9.21□□□□□ -0.94
BRCC3-206ENST00000399042 ZNF135P52742 658 aaPredicted RBP9.21□□□□□ -0.94
BRCC3-206ENST00000399042 ZXDBP98169 803 aa9.21□□□□□ -0.94
BRCC3-206ENST00000399042 GAD2Q05329 585 aa9.21□□□□□ -0.94
BRCC3-206ENST00000399042 SCAPQ12770 1279 aa9.21□□□□□ -0.94
BRCC3-206ENST00000399042 TFDP2Q14188 446 aa9.21□□□□□ -0.94
BRCC3-206ENST00000399042 LLGL1Q15334 1064 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms