RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 NCAPG2Q86XI2 1143 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 PQLC1Q8N2U9 271 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 SYTL5Q8TDW5 730 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 LENG8Q96PV6 779 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 PLEKHG4BQ96PX9 1271 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 ZNF341Q9BYN7 854 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 MAGEB5Q9BZ81 275 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 ST6GALNAC4Q9H4F1 302 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 TMX2Q9Y320 296 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 AFG3L2Q9Y4W6 797 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 PCDHA10Q9Y5I2 948 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 HMX2A2RU54 273 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 APOC4-APOC2K7ER74 178 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 TPP1O14773 563 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 STAMBPO95630 424 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 APOC2P02655 101 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 HMGCRP04035 888 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 AOC1P19801 751 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 GARTP22102 1010 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 STT3AP46977 705 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 PRKCEQ02156 737 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 HNRNPDQ14103 355 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 FLOT2Q14254 428 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 MAVSQ7Z434 540 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 CMC1Q7Z7K0 106 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 CAND1Q86VP6 1230 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 FBXW8Q8N3Y1 598 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 TMA16Q96EY4 203 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 UNKQ9C0B0 810 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 FIS1Q9Y3D6 152 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 TNRC6CQ9HCJ0 1690 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 WDR27A2RRH5 827 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 NDC80O14777 642 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 ZBTB14O43829 449 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 HSPA4LO95757 839 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 XRCC1P18887 633 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 TBXAS1P24557 533 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 ARRB2P32121 409 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 RGS7P49802 495 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 CCR3P51677 355 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 BCAR1P56945 870 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 PRAMEP78395 509 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 WASHC5Q12768 1159 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 SNX32Q86XE0 403 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 CCDC60Q8IWA6 550 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 SIX5Q8N196 739 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 CMTM5Q96DZ9 223 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 SIKE1Q9BRV8 207 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 TMEM39BQ9GZU3 492 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 POPDC2Q9HBU9 364 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 PTTG2Q9NZH5 202 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 BTBD7Q9P203 1132 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 FETUBQ9UGM5 382 aa10.16□□□□□ -0.78
PTCHD4-202ENST00000398738 MYH9P35579 1960 aaKnown RBP10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 SLC15A5A6NIM6 579 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 KLF11O14901 512 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 ADCY6O43306 1168 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 COX4I1P13073 169 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 TYK2P29597 1187 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 SLC5A2P31639 672 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 CCR10P46092 362 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 PSMD7P51665 324 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 CDH15P55291 814 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 SNRPFP62306 86 aaKnown RBP10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 OR6B2Q6IFH4 312 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 KLC3Q6P597 504 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 RTKN2Q8IZC4 609 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 ZNF512Q96ME7 567 aaPredicted RBP10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 CATSPER2Q96P56 530 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 PEBP4Q96S96 227 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 CCT7Q99832 543 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 ADPGKQ9BRR6 497 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 KLC2Q9H0B6 622 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 TXNDC16Q9P2K2 825 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 ARHGAP26Q9UNA1 814 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 SSX2IPQ9Y2D8 614 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 H3BNX3 289 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 CCNT2O60583 730 aaKnown RBP10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 METTL18O95568 372 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 PENKP01210 267 aaPredicted RBP10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 ERBB2P04626 1255 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 EDN1P05305 212 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 PDGFRAP16234 1089 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 POLR2BP30876 1174 aaKnown RBP10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 CDKL1Q00532 357 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 MYBPC1Q00872 1141 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 KCNJ11Q14654 390 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 C16orf72Q14CZ0 275 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 PGM5Q15124 567 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 SLC9B1Q4ZJI4 515 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 HSP90AA5PQ58FG0 334 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 VASH1Q7L8A9 365 aaPredicted RBP10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 BHLHE22Q8NFJ8 381 aaPredicted RBP10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 PIWIL1Q96J94 861 aaKnown RBP10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 IDI2Q9BXS1 227 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 Q9H521 79 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 DHX35Q9H5Z1 703 aaKnown RBP10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 TMEM216Q9P0N5 145 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 SEPT10Q9P0V9 454 aa10.15□□□□□ -0.78
PTCHD4-202ENST00000398738 DNAJB4Q9UDY4 337 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms