RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 TRPC5OSA6NMA1 111 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 HMGB3O15347 200 aaKnown RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 MATN4O95460 622 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 GIMD1P0DJR0 217 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 CREMQ03060 361 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 LAMTOR4Q0VGL1 99 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 PUS10Q3MIT2 529 aaKnown RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 PHF19Q5T6S3 580 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 SMYD1Q8NB12 490 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 CCDC54Q8NEL0 328 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 C5orf34Q96MH7 638 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 SERPINB12Q96P63 405 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 TM6SF2Q9BZW4 377 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 BHLHE41Q9C0J9 482 aaPredicted RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 YIPF3Q9GZM5 350 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 PSMC3IPQ9P2W1 217 aaPredicted RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 O00370 1275 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 RNASEH2AO75792 299 aaKnown RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 USP17L7P0C7H9 530 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 CPA2P48052 419 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 PPP2R2AP63151 447 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 NOGQ13253 232 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 AGGF1Q8N302 714 aaeCLIP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 C19orf18Q8NEA5 215 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 DTNBP1Q96EV8 351 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 MYCBPQ99417 103 aaPredicted RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 SH3GL2Q99962 352 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 HIPK3Q9H422 1215 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 CLDND1Q9NY35 253 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 KIAA1257Q9ULG3 409 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 MRPS17Q9Y2R5 130 aaKnown RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 PHF20L1A8MW92 1017 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 SLC16A3O15427 465 aaKnown RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 GLUD1P00367 558 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 SERPINF2P08697 491 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 RBP3P10745 1247 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 MAGEA10P43363 369 aaPredicted RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 GABPB1Q06547 395 aaPredicted RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 CUL2Q13617 745 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 OLFML2BQ68BL8 750 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 CDC73Q6P1J9 531 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 MAML3Q96JK9 1138 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 NOP53Q9NZM5 478 aaKnown RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 RIMKLBQ9ULI2 386 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 NOX1Q9Y5S8 564 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 SESN1Q9Y6P5 492 aa11.51□□□□□ -0.57
RGPD2-201ENST00000398146 TCOF1Q13428 1488 aaKnown RBP11.51□□□□□ -0.57
RGPD2-201ENST00000398146 MGRN1O60291 552 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 FDFT1P37268 417 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 OC90Q02509 493 aaPredicted RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 CASP8Q14790 479 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 RGMBQ6NW40 437 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 RASGEF1AQ8N9B8 481 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 CATSPER1Q8NEC5 780 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 AP4E1Q9UPM8 1137 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 MROH7Q68CQ1 1323 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 RAD51BO15315 384 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 ZNF445P59923 1031 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 GRB14Q14449 540 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 MFSD7Q6UXD7 560 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 HEATR4Q86WZ0 1026 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 ZNF671Q8TAW3 534 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 TRNT1Q96Q11 434 aaKnown RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 DIABLOQ9NR28 239 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 IQSEC2Q5JU85 1478 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 ANKRD65E5RJM6 399 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 MSCO60682 206 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 ZNF7P17097 686 aaPredicted RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 CDC25BP30305 580 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 MINDY4Q4G0A6 757 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 GFM2Q969S9 779 aaKnown RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 SMARCD1Q96GM5 515 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 TNKS2Q9H2K2 1166 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 ZNF232Q9UNY5 417 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 AK5Q9Y6K8 562 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 ADH1CP00326 375 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 F9P00740 461 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 PSMA4P25789 261 aaKnown RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 PDHA2P29803 388 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 GDI2P50395 445 aaKnown RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 DGKEP52429 567 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 ABRQ12979 859 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 PEX6Q13608 980 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 GALNT7Q86SF2 657 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 DCLK3Q9C098 648 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 HCN3Q9P1Z3 774 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 UBA2Q9UBT2 640 aaPredicted RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 PPP2R3BQ9Y5P8 575 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 IDH3BO43837 385 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 TRIM3O75382 744 aaPredicted RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 FBXO21O94952 628 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 HPCAL1P37235 193 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 HSPA9P38646 679 aaKnown RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 XKR4Q5GH76 650 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 PPP1R15BQ5SWA1 713 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 FAM46CQ5VWP2 391 aa11.5□□□□□ -0.57
RGPD2-201ENST00000398146 ZNF57Q68EA5 555 aaPredicted RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 USP50Q70EL3 339 aaPredicted RBP11.5□□□□□ -0.57
RGPD2-201ENST00000398146 FAM129CQ86XR2 697 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms