RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 PCDHA1Q9Y5I3 950 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 FAM170AA1A519 330 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 C7orf72A4D263 438 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 GOLGA8CPA6NN73 597 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 USP17L15C9J2P7 530 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 USP17L13C9JLJ4 530 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 USP17L11C9JVI0 530 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 USP17L18D6R9N7 530 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 USP17L22D6RA61 530 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 USP17L17D6RBQ6 530 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 USP17L19D6RCP7 530 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 USP17L20D6RJB6 530 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 NOL3O60936 208 aaKnown RBP11.8□□□□□ -0.52
PUM3-202ENST00000397885 BCAS2O75934 225 aaPredicted RBP11.8□□□□□ -0.52
PUM3-202ENST00000397885 CHRNB1P11230 501 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 KRT6CP48668 564 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 PEX3P56589 373 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 TUBA1BP68363 451 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 MRPS5P82675 430 aaKnown RBP11.8□□□□□ -0.52
PUM3-202ENST00000397885 KRT76Q01546 638 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 USP17L24Q0WX57 530 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 IKBKEQ14164 716 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 PIGGQ5H8A4 983 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 FNBP1LQ5T0N5 605 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 PLA2G4FQ68DD2 849 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 ZNF280DQ6N043 979 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 C16orf46Q6P387 395 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 USP17L6PQ6QN14 398 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 TUBA1AQ71U36 451 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 PDCD6IPQ8WUM4 868 aaKnown RBP11.8□□□□□ -0.52
PUM3-202ENST00000397885 ALPK1Q96QP1 1244 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 ZNF347Q96SE7 839 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 FAM118BQ9BPY3 351 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 NPLQ9BXD5 320 aaPredicted RBP11.8□□□□□ -0.52
PUM3-202ENST00000397885 C20orf27Q9GZN8 174 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 KLHL25Q9H0H3 589 aa11.8□□□□□ -0.52
PUM3-202ENST00000397885 IPO11Q9UI26 975 aaKnown RBP11.8□□□□□ -0.52
PUM3-202ENST00000397885 A0A1W2PPW3 197 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 DYNC1LI2O43237 492 aaPredicted RBP11.79□□□□□ -0.52
PUM3-202ENST00000397885 FOXD2O60548 495 aaPredicted RBP11.79□□□□□ -0.52
PUM3-202ENST00000397885 CRHR1P34998 444 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 GPC3P51654 580 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 TMBIM6P55061 237 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 BNIP3Q12983 259 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 QRICH1Q2TAL8 776 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 TIGD2Q4W5G0 525 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 PRR16Q569H4 304 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 AARS2Q5JTZ9 985 aaKnown RBP11.79□□□□□ -0.52
PUM3-202ENST00000397885 NBPF12Q5TAG4 269 aaPredicted RBP11.79□□□□□ -0.52
PUM3-202ENST00000397885 SLX4IPQ5VYV7 408 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 PPP4R4Q6NUP7 873 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 IGFN1Q86VF2 1251 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 MCOLN2Q8IZK6 566 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 SIX6OS1Q8N1H7 587 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 SPERTQ8NA61 448 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 ZNF280CQ8ND82 737 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 DDX1Q92499 740 aaKnown RBP11.79□□□□□ -0.52
PUM3-202ENST00000397885 TANKQ92844 425 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 ACDQ96AP0 544 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 SLC10A4Q96EP9 437 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 WNK4Q96J92 1243 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 FAM20AQ96MK3 541 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 WDR83Q9BRX9 315 aaKnown RBP11.79□□□□□ -0.52
PUM3-202ENST00000397885 RMND5AQ9H871 391 aa11.79□□□□□ -0.52
PUM3-202ENST00000397885 TCRBV9S1A1TA0A576 114 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 S100BP04271 92 aaPredicted RBP11.78□□□□□ -0.52
PUM3-202ENST00000397885 SPATA31C1P0DKV0 1188 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 ETS1P14921 441 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 TM4SF4P48230 202 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 IDH3AP50213 366 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 NLRP11P59045 1033 aaKnown RBP11.78□□□□□ -0.52
PUM3-202ENST00000397885 PSMC6P62333 389 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 SPIRE1Q08AE8 756 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 ZNF846Q147U1 533 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 MSS51Q4VC12 460 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 FGD3Q5JSP0 725 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 FKBP1CQ5VVH2 108 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 BNC2Q6ZN30 1099 aaPredicted RBP11.78□□□□□ -0.52
PUM3-202ENST00000397885 PDZD8Q8NEN9 1154 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 DCAF4Q8WV16 495 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 CPT1BQ92523 772 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 CCDC17Q96LX7 622 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 RMDN3Q96TC7 470 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 APOL6Q9BWW8 343 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 TMEM117Q9H0C3 514 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 SIAEQ9HAT2 523 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 MAGEE1Q9HCI5 957 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 GINM1Q9NU53 330 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 ATP11BQ9Y2G3 1177 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 RBMX2Q9Y388 322 aaKnown RBP11.78□□□□□ -0.52
PUM3-202ENST00000397885 CORINQ9Y5Q5 1042 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 SSC5DA1L4H1 1573 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 TCP10L2B9ZVM9 353 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 TRIM49D1C9J1S8 452 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 J3QRK9 145 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 M0QX08 132 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 GPR25O00155 361 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 SLC22A2O15244 555 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 BANF1O75531 89 aa11.78□□□□□ -0.52
PUM3-202ENST00000397885 USP2O75604 605 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms