RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 BTBD6Q96KE9 485 aa19.86■□□□□ 0.77
HOXA9-202ENST00000396345 PRICKLE1Q96MT3 831 aaPredicted RBP19.86■□□□□ 0.77
HOXA9-202ENST00000396345 IP6K2Q9UHH9 426 aa19.86■□□□□ 0.77
HOXA9-202ENST00000396345 PCDHA13Q9Y5I0 950 aa19.86■□□□□ 0.77
HOXA9-202ENST00000396345 MYO1FO00160 1098 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 AOC1P19801 751 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 DRD1P21728 446 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 HOXD9P28356 352 aaPredicted RBP19.85■□□□□ 0.77
HOXA9-202ENST00000396345 GGCXP38435 758 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 CLCN5P51795 746 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 RPS24P62847 133 aaKnown RBP19.85■□□□□ 0.77
HOXA9-202ENST00000396345 KDSRQ06136 332 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 PIGHQ14442 188 aaPredicted RBP19.85■□□□□ 0.77
HOXA9-202ENST00000396345 ACAP1Q15027 740 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 PREPLQ4J6C6 727 aaPredicted RBP19.85■□□□□ 0.77
HOXA9-202ENST00000396345 RABGAP1LQ5R372 815 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 MPP7Q5T2T1 576 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 GRAMD4Q6IC98 578 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 FSTL4Q6MZW2 842 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 FBXL22Q6P050 247 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 SLFN11Q7Z7L1 901 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 C14orf80Q86SX3 495 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 CCDC105Q8IYK2 499 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 CFAP52Q8N1V2 620 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 SLC35G2Q8TBE7 412 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 NTAN1Q96AB6 310 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 C1orf74Q96LT6 269 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 NCAPGQ9BPX3 1015 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 LRFN3Q9BTN0 628 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 ARHGEF4Q9NR80 690 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 STIM2Q9P246 746 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 FBXO10Q9UK96 956 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 VANGL2Q9ULK5 521 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 SNX10Q9Y5X0 201 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 KIAA1549LQ6ZVL6 1849 aa19.85■□□□□ 0.77
HOXA9-202ENST00000396345 PI15O43692 258 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 KAT7O95251 611 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 EGFP01133 1207 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 APODP05090 189 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 CHRNB1P11230 501 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 GRIA2P42262 883 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 DGKGP49619 791 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 LRRC32Q14392 662 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 DGKKQ5KSL6 1271 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 RHOT2Q8IXI1 618 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 PHTF2Q8N3S3 785 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 ARFGAP1Q8N6T3 406 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 RPRD1AQ96P16 312 aaPredicted RBP19.84■□□□□ 0.77
HOXA9-202ENST00000396345 SLC2A11Q9BYW1 496 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 LMAN1LQ9HAT1 526 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 CLEC4EQ9ULY5 219 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 ZDBF2Q9HCK1 2354 aa19.84■□□□□ 0.77
HOXA9-202ENST00000396345 TRIM24O15164 1050 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 DCNP07585 359 aaKnown RBP19.83■□□□□ 0.77
HOXA9-202ENST00000396345 CISD3P0C7P0 127 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 AIF1P55008 147 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 MESP2Q0VG99 397 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 SCAPQ12770 1279 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 FZD5Q13467 585 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 CCINQ13939 588 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 TTC39BQ5VTQ0 682 aaPredicted RBP19.83■□□□□ 0.77
HOXA9-202ENST00000396345 RNF43Q68DV7 783 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 LRRC31Q6UY01 552 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 CARNMT1Q8N4J0 409 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 NIPA2Q8N8Q9 360 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 CCDC112Q8NEF3 446 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 RFFLQ8WZ73 363 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 IGSF8Q969P0 613 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 OSBPL2Q9H1P3 480 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 OSGEPQ9NPF4 335 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 PCSK1NQ9UHG2 260 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 LCMT1Q9UIC8 334 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 FZD10Q9ULW2 581 aa19.83■□□□□ 0.77
HOXA9-202ENST00000396345 A0A0A0MRY4 1105 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 TBC1D3BA6NDS4 549 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 E9PAM4 449 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 PRPSAP2O60256 369 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 SRGAP2O75044 1071 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 LRCH4O75427 683 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 MTA2O94776 668 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 MIPP30301 263 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 PCK1P35558 622 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 TCEAL1Q15170 157 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 C5orf22Q49AR2 442 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 EFHC2Q5JST6 749 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 NUDT18Q6ZVK8 323 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 MFN1Q8IWA4 741 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 CCDC117Q8IWD4 279 aaPredicted RBP19.82■□□□□ 0.76
HOXA9-202ENST00000396345 TERB1Q8NA31 727 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 ACRBPQ8NEB7 543 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 CLDN23Q96B33 292 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 RBM12Q9NTZ6 932 aaKnown RBP19.82■□□□□ 0.76
HOXA9-202ENST00000396345 OR12D3Q9UGF7 316 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 SLC27A6Q9Y2P4 619 aa19.82■□□□□ 0.76
HOXA9-202ENST00000396345 REXO2Q9Y3B8 237 aaKnown RBP19.82■□□□□ 0.76
HOXA9-202ENST00000396345 LUC7L3O95232 432 aaKnown RBP19.81■□□□□ 0.76
HOXA9-202ENST00000396345 TNFRSF4P43489 277 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 RPS9P46781 194 aaKnown RBP19.81■□□□□ 0.76
HOXA9-202ENST00000396345 KRT83P78385 493 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 NRG1Q02297 640 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms