RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 SCML4Q8N228 414 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 MCUQ8NE86 351 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 DCAKDQ8WVC6 231 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 CASP10Q92851 521 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 CELF6Q96J87 481 aaKnown RBP11.3□□□□□ -0.6
CASP3-202ENST00000393585 SEC16BQ96JE7 1060 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 SMC6Q96SB8 1091 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 EPAS1Q99814 870 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 PAIP2Q9BPZ3 127 aaKnown RBP11.3□□□□□ -0.6
CASP3-202ENST00000393585 CCDC134Q9H6E4 229 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 NKIRAS1Q9NYS0 192 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 ADAM28Q9UKQ2 775 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 A0A1W2PQH9 124 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 FAM47DPA6NHR8 397 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 GOLGA8RI6L899 631 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 IGLV3-25P01717 112 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 CCL23P55773 120 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 WDR4P57081 412 aaKnown RBP11.3□□□□□ -0.6
CASP3-202ENST00000393585 CRADDP78560 199 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 NR1H3Q13133 447 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 OLIG2Q13516 323 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 CTXN3Q4LDR2 81 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 RWDD4Q6NW29 188 aaKnown RBP11.3□□□□□ -0.6
CASP3-202ENST00000393585 PID1Q7Z2X4 250 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 CTAGE3PQ8IX95 158 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 DCP1BQ8IZD4 617 aaKnown RBP11.3□□□□□ -0.6
CASP3-202ENST00000393585 SIGLEC10Q96LC7 697 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 CASD1Q96PB1 797 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 DHRS4Q9BTZ2 278 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 FRMD8Q9BZ67 464 aaPredicted RBP11.3□□□□□ -0.6
CASP3-202ENST00000393585 ABCC13Q9NSE7 274 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 OSER1Q9NX31 292 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 LRFN2Q9ULH4 789 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 TTLL3Q9Y4R7 772 aa11.3□□□□□ -0.6
CASP3-202ENST00000393585 COL4A4P53420 1690 aaPredicted RBP11.3□□□□□ -0.6
CASP3-202ENST00000393585 TCP11X1B4DZS4 312 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 DNM1LO00429 736 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 FAM155BO75949 473 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 MOCS2O96007 188 aaPredicted RBP11.29□□□□□ -0.6
CASP3-202ENST00000393585 CPP00450 1065 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 KRT4P19013 534 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 MAGEA3P43357 314 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 SLC11A1P49279 550 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 USP46P62068 366 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 IFT88Q13099 833 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 ARHGEF6Q15052 776 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 ZKSCAN8Q15776 578 aaPredicted RBP11.29□□□□□ -0.6
CASP3-202ENST00000393585 GKAP1Q5VSY0 366 aaPredicted RBP11.29□□□□□ -0.6
CASP3-202ENST00000393585 TMEM173Q86WV6 379 aaPredicted RBP11.29□□□□□ -0.6
CASP3-202ENST00000393585 PPCSQ9HAB8 311 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 PRDM16Q9HAZ2 1276 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 MARCH5Q9NX47 278 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 KLHL8Q9P2G9 620 aaPredicted RBP11.29□□□□□ -0.6
CASP3-202ENST00000393585 FETUBQ9UGM5 382 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 CXorf49A8MYA2 514 aaPredicted RBP11.29□□□□□ -0.6
CASP3-202ENST00000393585 OPHN1O60890 802 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 STK10O94804 968 aaKnown RBP11.29□□□□□ -0.6
CASP3-202ENST00000393585 TSHRP16473 764 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 CA4P22748 312 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 RPA3P35244 121 aaPredicted RBP11.29□□□□□ -0.6
CASP3-202ENST00000393585 FDFT1P37268 417 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 HCAR3P49019 387 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 EIF4EBP2Q13542 120 aaPredicted RBP11.29□□□□□ -0.6
CASP3-202ENST00000393585 SPARCL1Q14515 664 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 RASA2Q15283 850 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 TRMT10BQ6PF06 316 aaKnown RBP11.29□□□□□ -0.6
CASP3-202ENST00000393585 UNC5AQ6ZN44 842 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 PPM1NQ8N819 430 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 MZB1Q8WU39 189 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 CKAP2Q8WWK9 683 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 FERMT1Q9BQL6 677 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 PPP1R12CQ9BZL4 782 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 C12orf65Q9H3J6 166 aaKnown RBP11.29□□□□□ -0.6
CASP3-202ENST00000393585 FGFR1OP2Q9NVK5 253 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 IKBKGQ9Y6K9 419 aa11.29□□□□□ -0.6
CASP3-202ENST00000393585 SYN3O14994 580 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 C1QAP02745 245 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 INHBAP08476 426 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 PTPN3P26045 913 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 SESN2P58004 480 aaPredicted RBP11.28□□□□□ -0.6
CASP3-202ENST00000393585 NFE2Q16621 373 aaPredicted RBP11.28□□□□□ -0.6
CASP3-202ENST00000393585 NUGGCQ68CJ6 796 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 PDZD4Q76G19 769 aaPredicted RBP11.28□□□□□ -0.6
CASP3-202ENST00000393585 CACNA2D3Q8IZS8 1091 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 SLC44A1Q8WWI5 657 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 SEPT8Q92599 483 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 TGS1Q96RS0 853 aaKnown RBP11.28□□□□□ -0.6
CASP3-202ENST00000393585 EBNA1BP2Q99848 306 aaKnown RBP11.28□□□□□ -0.6
CASP3-202ENST00000393585 ELAC2Q9BQ52 826 aaKnown RBP11.28□□□□□ -0.6
CASP3-202ENST00000393585 SMOC2Q9H3U7 446 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 ELAC1Q9H777 363 aaKnown RBP11.28□□□□□ -0.6
CASP3-202ENST00000393585 SMYD2Q9NRG4 433 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 SENP1Q9P0U3 644 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.28□□□□□ -0.6
CASP3-202ENST00000393585 TBKBP1A7MCY6 615 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 UGT1A9O60656 530 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 PAGE1O75459 146 aa11.28□□□□□ -0.6
CASP3-202ENST00000393585 SPAG6O75602 509 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms