RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PLEKHA5Q9HAU0 1116 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 DNAJC28Q9NX36 388 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.37■□□□□ 0.691e-8■■□□□ 11.6
CBX1-202ENST00000393408 OPHN1O60890 802 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 SMIM24O75264 130 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 ZNF286BP0CG31 522 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 ALOX15P16050 662 aaPredicted RBP19.36■□□□□ 0.69
CBX1-202ENST00000393408 GRK2P25098 689 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 CRABP2P29373 138 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 ARRB2P32121 409 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 IDH3AP50213 366 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 PDE1BQ01064 536 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 DSG1Q02413 1049 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 INSCQ1MX18 579 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 DCAF4L1Q3SXM0 396 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 GSTCDQ8NEC7 633 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 SNX27Q96L92 541 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 NR1H4Q96RI1 486 aaPredicted RBP19.36■□□□□ 0.69
CBX1-202ENST00000393408 ECSITQ9BQ95 431 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 SPATS2LQ9NUQ6 558 aaKnown RBP19.36■□□□□ 0.69
CBX1-202ENST00000393408 PNPOQ9NVS9 261 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 SYBUQ9NX95 663 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 SNTG2Q9NY99 539 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 RCOR3Q9P2K3 495 aaPredicted RBP19.36■□□□□ 0.69
CBX1-202ENST00000393408 FZD10Q9ULW2 581 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 USP1O94782 785 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 PPM1JQ5JR12 505 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 AAGABQ6PD74 315 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 ARMCX2Q7L311 632 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 ADGRG6Q86SQ4 1221 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 POU5F2Q8N7G0 328 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 C18orf25Q96B23 403 aaPredicted RBP19.36■□□□□ 0.69
CBX1-202ENST00000393408 P2RY11Q96G91 374 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 NAT9Q9BTE0 207 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 TMEM216Q9P0N5 145 aa19.36■□□□□ 0.69
CBX1-202ENST00000393408 ZNF195O14628 629 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 STK10O94804 968 aaKnown RBP19.35■□□□□ 0.69
CBX1-202ENST00000393408 BAG2O95816 211 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 EFHC1Q5JVL4 640 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 FAM131BQ86XD5 332 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 SPDYE1Q8NFV5 336 aaPredicted RBP19.35■□□□□ 0.69
CBX1-202ENST00000393408 PPP4R1Q8TF05 950 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 FAM96AQ9H5X1 160 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 COPG2Q9UBF2 871 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 EME2A4GXA9 379 aaPredicted RBP19.35■□□□□ 0.69
CBX1-202ENST00000393408 ASB14A6NK59 587 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 BUD23O43709 281 aaKnown RBP19.35■□□□□ 0.69
CBX1-202ENST00000393408 CCNT2O60583 730 aaKnown RBP19.35■□□□□ 0.69
CBX1-202ENST00000393408 CHRM1P11229 460 aaPredicted RBP19.35■□□□□ 0.69
CBX1-202ENST00000393408 PSMB4P28070 264 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 GLUD2P49448 558 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 COPAP53621 1224 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 BSPRYQ5W0U4 402 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 RASSF3Q86WH2 238 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 NETO2Q8NC67 525 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 C16orf70Q9BSU1 422 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 CEP41Q9BYV8 373 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 PPP1R12CQ9BZL4 782 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 MROH8Q9H579 483 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 S100A14Q9HCY8 104 aa19.35■□□□□ 0.69
CBX1-202ENST00000393408 ARHGAP42A6NI28 874 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 CXCL11O14625 94 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 PDGFRBP09619 1106 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 MYL4P12829 197 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 MATKP42679 507 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 ACADSBP45954 432 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 HARS2P49590 506 aaKnown RBP19.34■□□□□ 0.69
CBX1-202ENST00000393408 RALGPS1Q5JS13 557 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 FOXB2Q5VYV0 432 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 TAPT1Q6NXT6 567 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 MAMDC4Q6UXC1 1216 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 CRYBG2Q8N1P7 616 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 BEST2Q8NFU1 509 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 KBTBD7Q8WVZ9 684 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 PRDM16Q9HAZ2 1276 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 ERVK-10P10266 1014 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 TYK2P29597 1187 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 GP5P40197 560 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 BAG6P46379 1132 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 ABCE1P61221 599 aaKnown RBP19.34■□□□□ 0.69
CBX1-202ENST00000393408 BTKQ06187 659 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 CDC16Q13042 620 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 THEMIS2Q5TEJ8 643 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 C9orf57Q5W0N0 161 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 PGM2L1Q6PCE3 622 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 RSPH3Q86UC2 560 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 PPTC7Q8NI37 304 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 PIDD1Q9HB75 910 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 IL1RAPL1Q9NZN1 696 aa19.34■□□□□ 0.69
CBX1-202ENST00000393408 ADCY6O43306 1168 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 RALBP11234 206 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 HOXA11P31270 313 aaPredicted RBP19.33■□□□□ 0.69
CBX1-202ENST00000393408 GMPRP36959 345 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 MLH1P40692 756 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 SMAD1Q15797 465 aaKnown RBP19.33■□□□□ 0.69
CBX1-202ENST00000393408 SLC25A52Q3SY17 297 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 GLRA4Q5JXX5 417 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 MARCH8Q5T0T0 291 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 ZNF410Q86VK4 478 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 ERO1BQ86YB8 467 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms