RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 KRT5P13647 590 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 EN2P19622 333 aaPredicted RBP1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 RBL1P28749 1068 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 PBX1P40424 430 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 STAT6P42226 847 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 ATP12AP54707 1039 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 POLE2P56282 527 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 SELENOVP59797 346 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 FMO1Q01740 532 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 ACOX1Q15067 660 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 PLCB4Q15147 1175 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 ANXA2RQ3ZCQ2 193 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 TTC39AQ5SRH9 613 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 C8orf82Q6P1X6 216 aaPredicted RBP1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 RHBDF2Q6PJF5 856 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 LRIG3Q6UXM1 1119 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 Q6ZSV7 163 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 GRAMD1CQ8IYS0 662 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 FSTL5Q8N475 847 aaPredicted RBP1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 WDSUB1Q8N9V3 476 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 LMNTD1Q8N9Z9 388 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 LILRB1Q8NHL6 650 aaPredicted RBP1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 KAT2AQ92830 837 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 HPS3Q969F9 1004 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 ZNF668Q96K58 619 aaPredicted RBP1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 EPYCQ99645 322 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 WDR77Q9BQA1 342 aaPredicted RBP1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 STK31Q9BXU1 1019 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 POLDIP3Q9BY77 421 aaKnown RBP1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 DHX36Q9H2U1 1008 aaKnown RBP1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 ABHD16BQ9H3Z7 469 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 IL21RQ9HBE5 538 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 ERVK-5Q9HDB9 667 aa1.67□□□□□ -2.14
RNU6-239P-201ENST00000390990 ASAP2O43150 1006 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 XPNPEP2O43895 674 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 IL33O95760 270 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 SLC3A2P08195 630 aaKnown RBP1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 RFPL3SP0C7P2 107 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 CPT1AP50416 773 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 ZP1P60852 638 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 TUBA1BP68363 451 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 BNC1Q01954 994 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 NSUN2Q08J23 767 aaKnown RBP eCLIP1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 ST3GAL1Q11201 340 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 DMP1Q13316 513 aaPredicted RBP1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 HNF4GQ14541 408 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 MANEALQ5VSG8 457 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 ZNF367Q7RTV3 350 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 FJX1Q86VR8 437 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 IL17RCQ8NAC3 791 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 POC1AQ8NBT0 407 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 ASB12Q8WXK4 309 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 ZDHHC12Q96GR4 267 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 ZNF347Q96SE7 839 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 MAP3K14Q99558 947 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 TRMT61BQ9BVS5 477 aaKnown RBP1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 STK32BQ9NY57 414 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 COL20A1Q9P218 1284 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 HDAC9Q9UKV0 1011 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 ATP8A1Q9Y2Q0 1164 aa1.66□□□□□ -2.14
RNU6-239P-201ENST00000390990 TRIM43BA6NCK2 446 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 MBD3L4A6NDZ8 208 aaPredicted RBP1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 MBD3L3A6NE82 208 aaPredicted RBP1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 TBX3O15119 743 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 LIASO43766 372 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 EXTL3O43909 919 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 SNUPNO95149 360 aaKnown RBP1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 TPH1P17752 444 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 NCLP19338 710 aaKnown RBP1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 AKAP5P24588 427 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 ACVR2AP27037 513 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 HTR1BP28222 390 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 TRAF2Q12933 501 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 SLC29A2Q14542 456 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 SLC1A5Q15758 541 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 FSCBQ5H9T9 825 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 ATAT1Q5SQI0 421 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 LCE1BQ5T7P3 118 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 PLAG1Q6DJT9 500 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 SUSD1Q6UWL2 747 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 C9orf139Q6ZV77 190 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 KDELC2Q7Z4H8 507 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 DENND1CQ8IV53 801 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 TCP11L2Q8N4U5 519 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 FAM47BQ8NA70 645 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 SUN3Q8TAQ9 357 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 FAM216AQ8WUB2 273 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 TRIM43Q96BQ3 446 aaPredicted RBP1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 C1GALT1C1Q96EU7 318 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 GPR78Q96P69 363 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 SELENOOQ9BVL4 669 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 TRIM2Q9C040 744 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 FAM83DQ9H4H8 585 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 CATSPERBQ9H7T0 1116 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 ATP6V0A4Q9HBG4 840 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 MID2Q9UJV3 735 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 USP19O94966 1318 aa1.65□□□□□ -2.15
RNU6-239P-201ENST00000390990 IGKV3D-15A0A087WSY6 115 aa1.64□□□□□ -2.15
RNU6-239P-201ENST00000390990 IGKV6D-41A0A0C4DH26 115 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms