RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 TACR2P21452 398 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 BCKDHBP21953 392 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 MMP8P22894 467 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 CCR1P32246 355 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 GBP1P32455 592 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 IL12RB1P42701 662 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 CXCR3P49682 368 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 ZNF234Q14588 700 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 E2F5Q15329 346 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 C5orf22Q49AR2 442 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 NAA35Q5VZE5 725 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 PMS2CLQ68D20 193 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 TRNP1Q6NT89 227 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 TRIM72Q6ZMU5 477 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 METTL3Q86U44 580 aaKnown RBP11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 C11orf74Q86VG3 221 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 ZNF557Q8N988 423 aaPredicted RBP11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 UCMAQ8WVF2 138 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 CPA5Q8WXQ8 436 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 SORCS1Q8WY21 1168 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 BAP1Q92560 729 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 TTC17Q96AE7 1141 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 MRGPRX1Q96LB2 322 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 SPAG5Q96R06 1193 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 PCDHB18PQ96TA0 734 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 SYT11Q9BT88 431 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 PDCL3Q9H2J4 239 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 TMEM245Q9H330 911 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 SYNCQ9H7C4 482 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 ABCB8Q9NUT2 735 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 TMEM51Q9NW97 253 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 DDIT4Q9NX09 232 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 MBD1Q9UIS9 605 aaPredicted RBP11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 GGA2Q9UJY4 613 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 INTS6Q9UL03 887 aaKnown RBP11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 PCDHGA5Q9Y5G8 931 aa11.8□□□□□ -0.52
IGHV4-28-201ENST00000390612 A0A1W2PQC6 194 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 SYCE3A1L190 88 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 ENDOD1O94919 500 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 MOCS2O96007 188 aaPredicted RBP11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 NDUFV2P19404 249 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 CD70P32970 193 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 GSCP56915 257 aaPredicted RBP11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 SPEM2Q0P670 501 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 MTA1Q13330 715 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 CSRP2Q16527 193 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 PTPRNQ16849 979 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 SLC25A52Q3SY17 297 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 C2CD6Q53TS8 623 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 FSCBQ5H9T9 825 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 RAP1GAP2Q684P5 730 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 SDE2Q6IQ49 451 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 CHST9Q7L1S5 443 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 IRF2BP2Q7Z5L9 587 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 ZNF683Q8IZ20 524 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 FRMD1Q8N878 549 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 ATP6V0D2Q8N8Y2 350 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 HMGB4Q8WW32 186 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 RLN3Q8WXF3 142 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 MYO19Q96H55 970 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 NAP1L5Q96NT1 182 aaPredicted RBP11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 HINFPQ9BQA5 517 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 FAM204AQ9H8W3 233 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 CBX8Q9HC52 389 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 ANLNQ9NQW6 1124 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 SEMA4GQ9NTN9 838 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 PIGVQ9NUD9 493 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 ARHGEF38Q9NXL2 777 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 MYO6Q9UM54 1294 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 INVSQ9Y283 1065 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 RAD54BQ9Y620 910 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 NCOR2Q9Y618 2525 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 DOCK9Q9BZ29 2069 aa11.79□□□□□ -0.52
IGHV4-28-201ENST00000390612 ADAMTS9Q9P2N4 1935 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 BCLAF3A2AJT9 711 aaKnown RBP11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 M0QYT0 321 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 RHOBTB1O94844 696 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 LUC7L3O95232 432 aaKnown RBP11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 ADCY5O95622 1261 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 DLDP09622 509 aaKnown RBP11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 ZNF806P0C7X5 589 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 PTMSP20962 102 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 PRKCHP24723 683 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 FLT3P36888 993 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 COPAP53621 1224 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 RNASE9P60153 205 aaKnown RBP11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 CENPCQ03188 943 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 LMAN2Q12907 356 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 CAMK2GQ13555 558 aaPredicted RBP11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 BYSLQ13895 437 aaKnown RBP11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 NR1I3Q14994 352 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 ELF2Q15723 593 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 CLEC16AQ2KHT3 1053 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 FUT11Q495W5 492 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 SPDYCQ5MJ68 293 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 BRMS1LQ5PSV4 323 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 MBLAC2Q68D91 279 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 PHF13Q86YI8 300 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms