RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 RAP2AP10114 183 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 TNNT1P13805 278 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 FDPSP14324 419 aaKnown RBP6.79□□□□□ -1.32
TRAV35-201ENST00000390462 SLC6A4P31645 630 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 PNPLA4P41247 253 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 LIG4P49917 911 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 TKTL1P51854 596 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 ADAM17P78536 824 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 SKIDA1Q1XH10 827 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 AFMIDQ63HM1 303 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 FAM111BQ6SJ93 734 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 SARM1Q6SZW1 724 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 SUSD1Q6UWL2 747 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 CXXC5Q7LFL8 322 aaKnown RBP6.79□□□□□ -1.32
TRAV35-201ENST00000390462 PPP1R42Q7Z4L9 355 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 WFDC3Q8IUB2 231 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 ZBTB44Q8NCP5 570 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 SPATA20Q8TB22 786 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 TRIM44Q96DX7 344 aaPredicted RBP6.79□□□□□ -1.32
TRAV35-201ENST00000390462 MCRS1Q96EZ8 462 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 CFAP53Q96M91 514 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 CD180Q99467 661 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 NAA11Q9BSU3 229 aaPredicted RBP6.79□□□□□ -1.32
TRAV35-201ENST00000390462 SPXQ9BT56 116 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 TEX13BQ9BXU2 312 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 SIK2Q9H0K1 926 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 SLC32A1Q9H598 525 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 CCDC134Q9H6E4 229 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 NRIP3Q9NQ35 241 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 ALKBH4Q9NXW9 302 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 DDX43Q9NXZ2 648 aaKnown RBP6.79□□□□□ -1.32
TRAV35-201ENST00000390462 PIM2Q9P1W9 311 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 SLC23A1Q9UHI7 598 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 TRIM17Q9Y577 477 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 FPGT-TNNI3KV9GXZ4 949 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 STRCP1A6NGW2 1772 aa6.79□□□□□ -1.32
TRAV35-201ENST00000390462 A0A1W2PQM1 296 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 TEX22C9J3V5 150 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 C22orf31O95567 290 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 APBB3O95704 486 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 CHEK2O96017 543 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 URODP06132 367 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 TPOP07202 933 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 CYP2A6P11509 494 aaPredicted RBP6.78□□□□□ -1.32
TRAV35-201ENST00000390462 COX7A2P14406 83 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 CHN1P15882 459 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 FDXRP22570 491 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
TRAV35-201ENST00000390462 COL8A1P27658 744 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 TXKP42681 527 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 GPC3P51654 580 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 CYP4F8P98187 520 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 RPA4Q13156 261 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 MTA1Q13330 715 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 ADGRE1Q14246 886 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 CLCA4Q14CN2 919 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 RABEP1Q15276 862 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 TYSND1Q2T9J0 566 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 SLC9B1Q4ZJI4 515 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 CDC73Q6P1J9 531 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 MON1AQ86VX9 555 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 PTGR2Q8N8N7 351 aaPredicted RBP6.78□□□□□ -1.32
TRAV35-201ENST00000390462 NLGN4YQ8NFZ3 816 aaPredicted RBP6.78□□□□□ -1.32
TRAV35-201ENST00000390462 TNIP2Q8NFZ5 429 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 FBXO30Q8TB52 745 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 MDM1Q8TC05 714 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 INTS12Q96CB8 462 aaKnown RBP6.78□□□□□ -1.32
TRAV35-201ENST00000390462 MASTLQ96GX5 879 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 AGAP2Q99490 1192 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 NDC1Q9BTX1 674 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 SYNPO2LQ9H987 977 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 SPATS2LQ9NUQ6 558 aaKnown RBP6.78□□□□□ -1.32
TRAV35-201ENST00000390462 MPP6Q9NZW5 540 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 DNAJB11Q9UBS4 358 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 HESX1Q9UBX0 185 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 FBXL5Q9UKA1 691 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 USP22Q9UPT9 525 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 LIPT1Q9Y234 373 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 RCE1Q9Y256 329 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 DRG1Q9Y295 367 aaKnown RBP6.78□□□□□ -1.32
TRAV35-201ENST00000390462 BTBD3Q9Y2F9 522 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 ZBTB1Q9Y2K1 713 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 ZNF518AQ6AHZ1 1483 aa6.78□□□□□ -1.32
TRAV35-201ENST00000390462 SPAG9O60271 1321 aaKnown RBP6.77□□□□□ -1.32
TRAV35-201ENST00000390462 KIDINS220Q9ULH0 1771 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 NPATQ14207 1427 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 RNF17Q9BXT8 1623 aaKnown RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 ZC3H12DA2A288 527 aaKnown RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 C16orf96A6NNT2 1141 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 DNM1LO00429 736 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 RGS10O43665 173 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 TOM1O60784 492 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 HEXIM1O94992 359 aaKnown RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 IL18BPO95998 194 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 LMNAP02545 664 aaKnown RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 CFIP05156 583 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 SNRPA1P09661 255 aaKnown RBP6.77□□□□□ -1.33
TRAV35-201ENST00000390462 GYPEP15421 78 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 MTHFRP42898 656 aa6.77□□□□□ -1.33
TRAV35-201ENST00000390462 PTTG1IPP53801 180 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms