RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 NPM3O75607 178 aaKnown RBP16.4■□□□□ 0.22
COL2A1-202ENST00000380518 NUMBP49757 651 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 CIPCQ9C0C6 399 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 PRDM16Q9HAZ2 1276 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 TMEM51Q9NW97 253 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 POMCP01189 267 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 OR1E1P30953 314 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 PRKCQQ04759 706 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 TRAF7Q6Q0C0 670 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 DHFR2Q86XF0 187 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 C10orf53Q8N6V4 93 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 ELOVL4Q9GZR5 314 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 MMADHCQ9H3L0 296 aaPredicted RBP16.4■□□□□ 0.22
COL2A1-202ENST00000380518 STN1Q9H668 368 aaKnown RBP16.4■□□□□ 0.22
COL2A1-202ENST00000380518 LRCH1Q9Y2L9 728 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 CCNT2O60583 730 aaKnown RBP16.39■□□□□ 0.21
COL2A1-202ENST00000380518 DARSP14868 501 aaKnown RBP16.39■□□□□ 0.21
COL2A1-202ENST00000380518 YBX3P16989 372 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL2A1-202ENST00000380518 PBLDP30039 288 aaPredicted RBP16.39■□□□□ 0.21
COL2A1-202ENST00000380518 DPYSL3Q14195 570 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 FASTKQ14296 549 aaKnown RBP16.39■□□□□ 0.21
COL2A1-202ENST00000380518 C1orf186Q6ZWK4 172 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 OPTNQ96CV9 577 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 ZBTB45Q96K62 511 aaPredicted RBP16.39■□□□□ 0.21
COL2A1-202ENST00000380518 ATP13A1Q9HD20 1204 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 SASH3O75995 380 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 PCNAP12004 261 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 ARHGAP17Q68EM7 881 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 SNRNP27Q8WVK2 155 aaKnown RBP16.39■□□□□ 0.21
COL2A1-202ENST00000380518 ELMO3Q96BJ8 720 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 ABHD16BQ9H3Z7 469 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 MIEF1Q9NQG6 463 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 PADI4Q9UM07 663 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 TSC22D4Q9Y3Q8 395 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 MRASO14807 208 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 TFRCP02786 760 aaKnown RBP16.39■□□□□ 0.21
COL2A1-202ENST00000380518 ME2P23368 584 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 MLH1P40692 756 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 RFX3P48380 749 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 ITIH5Q86UX2 942 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 USP6NLQ92738 828 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 ANKRD63C9JTQ0 380 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 E5RJQ4 531 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 F8VP50 259 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 ADRA1DP25100 572 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 RBL1P28749 1068 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 EPHX2P34913 555 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 CACNA2D1P54289 1103 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 CEP78Q5JTW2 689 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 APOBEC3HQ6NTF7 200 aaKnown RBP16.39■□□□□ 0.21
COL2A1-202ENST00000380518 ZFP1Q6P2D0 407 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 PHACTR4Q8IZ21 702 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 TSEN34Q9BSV6 310 aaKnown RBP16.39■□□□□ 0.21
COL2A1-202ENST00000380518 MID1IP1Q9NPA3 183 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 KCND1Q9NSA2 647 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 SYBUQ9NX95 663 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 STMN3Q9NZ72 180 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 CPA4Q9UI42 421 aa16.39■□□□□ 0.21
COL2A1-202ENST00000380518 PIK3C2BO00750 1634 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 RPS7P62081 194 aaKnown RBP16.38■□□□□ 0.21
COL2A1-202ENST00000380518 CDK16Q00536 496 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 FAM45BPQ6NSW5 357 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 OR56A4Q8NGH8 313 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 TRAPPC12Q8WVT3 735 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 MTG1Q9BT17 334 aaPredicted RBP16.38■□□□□ 0.21
COL2A1-202ENST00000380518 STARD7Q9NQZ5 370 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.38■□□□□ 0.21
COL2A1-202ENST00000380518 PLA2G4CQ9UP65 541 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 USP20Q9Y2K6 914 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 GSTM1P09488 218 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 KDELR1P24390 212 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 TGM3Q08188 693 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 PPP3CAQ08209 521 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 ZNF614Q8N883 585 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 FNDC5Q8NAU1 212 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 TSEN2Q8NCE0 465 aaKnown RBP16.38■□□□□ 0.21
COL2A1-202ENST00000380518 SEPHS2Q99611 448 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 APBA2Q99767 749 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 POPDC2Q9HBU9 364 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 PIH1D1Q9NWS0 290 aaKnown RBP16.38■□□□□ 0.21
COL2A1-202ENST00000380518 AHSPQ9NZD4 102 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 INPP4BO15327 924 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 CYP2A7P20853 494 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 PPP2R1BP30154 601 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 KHDRBS2Q5VWX1 349 aaKnown RBP16.38■□□□□ 0.21
COL2A1-202ENST00000380518 SCARA3Q6AZY7 606 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 ASB2Q96Q27 587 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 SNCAIPQ9Y6H5 919 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 GAKO14976 1311 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 NFASCO94856 1347 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 SMNDC1O75940 238 aaKnown RBP eCLIP16.38■□□□□ 0.21
COL2A1-202ENST00000380518 LDLRP01130 860 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 IL5RAQ01344 420 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 MSLNQ13421 630 aaPredicted RBP16.38■□□□□ 0.21
COL2A1-202ENST00000380518 C1DQ13901 141 aaKnown RBP16.38■□□□□ 0.21
COL2A1-202ENST00000380518 FKBP1CQ5VVH2 108 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 FAM126BQ8IXS8 530 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 POU5F2Q8N7G0 328 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 METTL6Q8TCB7 284 aa16.38■□□□□ 0.21
COL2A1-202ENST00000380518 SLC25A23Q9BV35 468 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms