RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ZNF683Q8IZ20 524 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 LGI2Q8N0V4 545 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 NIPA2Q8N8Q9 360 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 BHMTQ93088 406 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 NCAPGQ9BPX3 1015 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 OSBPL2Q9H1P3 480 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 TMPRSS4Q9NRS4 437 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 DEC1Q9P2X7 70 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 IP6K2Q9UHH9 426 aa19.39■□□□□ 0.69
SSU72-203ENST00000378725 NDRG2Q9UN36 371 aaKnown RBP19.39■□□□□ 0.69
SSU72-203ENST00000378725 F5H5T6 163 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 MYO1FO00160 1098 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 NCAM2O15394 837 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 RNF8O76064 485 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 AIF1P55008 147 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 NRG1Q02297 640 aaPredicted RBP19.38■□□□□ 0.69
SSU72-203ENST00000378725 MESP2Q0VG99 397 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 SCAPQ12770 1279 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 CCINQ13939 588 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 PREPLQ4J6C6 727 aaPredicted RBP19.38■□□□□ 0.69
SSU72-203ENST00000378725 DGKKQ5KSL6 1271 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 C14orf80Q86SX3 495 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 CCDC185Q8N715 623 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 HJURPQ8NCD3 748 aaPredicted RBP19.38■□□□□ 0.69
SSU72-203ENST00000378725 SLC35G2Q8TBE7 412 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 ZNF564Q8TBZ8 553 aaPredicted RBP19.38■□□□□ 0.69
SSU72-203ENST00000378725 SIK2Q9H0K1 926 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 LMAN1LQ9HAT1 526 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 DNAJC17Q9NVM6 304 aaKnown RBP19.38■□□□□ 0.69
SSU72-203ENST00000378725 DLGAP2Q9P1A6 1054 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 CTTNBP2NLQ9P2B4 639 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 ANAPC7Q9UJX3 599 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 CLEC4EQ9ULY5 219 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 SLC27A6Q9Y2P4 619 aa19.38■□□□□ 0.69
SSU72-203ENST00000378725 DRGXA6NNA5 263 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 TBL1XO60907 577 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 MTA2O94776 668 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 EGFP01133 1207 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 PCK1P35558 622 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 GRIA2P42262 883 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 RPS9P46781 194 aaKnown RBP19.37■□□□□ 0.69
SSU72-203ENST00000378725 RPS24P62847 133 aaKnown RBP19.37■□□□□ 0.69
SSU72-203ENST00000378725 SCYL2Q6P3W7 929 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 SLFN11Q7Z7L1 901 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 RHOT2Q8IXI1 618 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 SYNPOQ8N3V7 929 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 EZH1Q92800 747 aaPredicted RBP19.37■□□□□ 0.69
SSU72-203ENST00000378725 IGSF8Q969P0 613 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 BTBD6Q96KE9 485 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 LCMT1Q9UIC8 334 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 FZD10Q9ULW2 581 aa19.37■□□□□ 0.69
SSU72-203ENST00000378725 IGLV3-10A0A075B6K4 115 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 K7EQS6 105 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 TRIM24O15164 1050 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 LRCH4O75427 683 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 KAT7O95251 611 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 APODP05090 189 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 TNFRSF4P43489 277 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 DGKGP49619 791 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 FBXO43Q4G163 708 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 RABGAP1LQ5R372 815 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 TTC39BQ5VTQ0 682 aaPredicted RBP19.36■□□□□ 0.69
SSU72-203ENST00000378725 GRAMD4Q6IC98 578 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 CFAP52Q8N1V2 620 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 FIBINQ8TAL6 211 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 RFFLQ8WZ73 363 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 LRFN3Q9BTN0 628 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 OSGEPQ9NPF4 335 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 LUC7LQ9NQ29 371 aaKnown RBP19.36■□□□□ 0.69
SSU72-203ENST00000378725 ARHGEF4Q9NR80 690 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 VANGL2Q9ULK5 521 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 REXO2Q9Y3B8 237 aaKnown RBP19.36■□□□□ 0.69
SSU72-203ENST00000378725 SNX10Q9Y5X0 201 aa19.36■□□□□ 0.69
SSU72-203ENST00000378725 TYW5A2RUC4 315 aaKnown RBP19.35■□□□□ 0.69
SSU72-203ENST00000378725 DCNP07585 359 aaKnown RBP19.35■□□□□ 0.69
SSU72-203ENST00000378725 MIPP30301 263 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 AVPR2P30518 371 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 GGCXP38435 758 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 MAGEA9P43362 315 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 LRRC32Q14392 662 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 LRRC31Q6UY01 552 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 CYP4V2Q6ZWL3 525 aaPredicted RBP19.35■□□□□ 0.69
SSU72-203ENST00000378725 KIAA0907Q7Z7F0 614 aaPredicted RBP19.35■□□□□ 0.69
SSU72-203ENST00000378725 LRRC8AQ8IWT6 810 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 TMEM105Q8N8V8 129 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 ZNF557Q8N988 423 aaPredicted RBP19.35■□□□□ 0.69
SSU72-203ENST00000378725 TERB1Q8NA31 727 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 LMLNQ96KR4 655 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 RPRD1AQ96P16 312 aaPredicted RBP19.35■□□□□ 0.69
SSU72-203ENST00000378725 MAGEB5Q9BZ81 275 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 RBM12Q9NTZ6 932 aaKnown RBP19.35■□□□□ 0.69
SSU72-203ENST00000378725 STIM2Q9P246 746 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 PPARGC1AQ9UBK2 798 aaKnown RBP19.35■□□□□ 0.69
SSU72-203ENST00000378725 OR12D3Q9UGF7 316 aa19.35■□□□□ 0.69
SSU72-203ENST00000378725 TBC1D3BA6NDS4 549 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 E9PAM4 449 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 PROSCO94903 275 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 LUC7L3O95232 432 aaKnown RBP19.34■□□□□ 0.69
SSU72-203ENST00000378725 IPO7O95373 1038 aaKnown RBP19.34■□□□□ 0.69
SSU72-203ENST00000378725 ARHGAP25P42331 645 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms