RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 MATKP42679 507 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 WASP42768 502 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 CDK17Q00537 523 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 ZC3H12AQ5D1E8 599 aaKnown RBP17.64■□□□□ 0.41
RER1-202ENST00000378512 MS4A13Q5J8X5 152 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 PMS2CLQ68D20 193 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 RFWD3Q6PCD5 774 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 BNIPLQ7Z465 357 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 ERICH1Q86X53 443 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 MYEOVQ96EZ4 313 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 PRMT1Q99873 361 aaKnown RBP17.64■□□□□ 0.41
RER1-202ENST00000378512 DDX50Q9BQ39 737 aaKnown RBP17.64■□□□□ 0.41
RER1-202ENST00000378512 VPS45Q9NRW7 570 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 RRN3Q9NYV6 651 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 CALCOCO1Q9P1Z2 691 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 THAP10Q9P2Z0 257 aaPredicted RBP17.64■□□□□ 0.41
RER1-202ENST00000378512 XPO7Q9UIA9 1087 aaKnown RBP17.64■□□□□ 0.41
RER1-202ENST00000378512 TMEM59LQ9UK28 342 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 MYO6Q9UM54 1294 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 NUP205Q92621 2012 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 A0A1W2PQC6 194 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 GRAP2O75791 330 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 RHOBTB1O94844 696 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 C7P10643 843 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 MMP8P22894 467 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 GSCP56915 257 aaPredicted RBP17.63■□□□□ 0.41
RER1-202ENST00000378512 USP39Q53GS9 565 aaKnown RBP17.63■□□□□ 0.41
RER1-202ENST00000378512 TRIM72Q6ZMU5 477 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 HMGB4Q8WW32 186 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 BAP1Q92560 729 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
RER1-202ENST00000378512 NUCKS1Q9H1E3 243 aaKnown RBP17.63■□□□□ 0.41
RER1-202ENST00000378512 PDCL3Q9H2J4 239 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 SYNCQ9H7C4 482 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 CBX8Q9HC52 389 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 POLMQ9NP87 494 aaPredicted RBP17.63■□□□□ 0.41
RER1-202ENST00000378512 ELOVL2Q9NXB9 296 aa17.63■□□□□ 0.41
RER1-202ENST00000378512 MBD1Q9UIS9 605 aaPredicted RBP17.63■□□□□ 0.41
RER1-202ENST00000378512 CEP192Q8TEP8 1941 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 DOCK4Q8N1I0 1966 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 TCRBV21S2A2A0A5A6 115 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 TIMM44O43615 452 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 APOEP02649 317 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 SLC2A3P11169 496 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 HOXB2P14652 356 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 CCR1P32246 355 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 LIMK1P53667 647 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 PTP4A2Q12974 167 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 MTA1Q13330 715 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 NR1I3Q14994 352 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 SKOR2Q2VWA4 1001 aaPredicted RBP17.62■□□□□ 0.41
RER1-202ENST00000378512 ZSCAN23Q3MJ62 389 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 NAA35Q5VZE5 725 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 IL31Q6EBC2 164 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 ARMCX6Q7L4S7 300 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 ZNF557Q8N988 423 aaPredicted RBP17.62■□□□□ 0.41
RER1-202ENST00000378512 HJURPQ8NCD3 748 aaPredicted RBP17.62■□□□□ 0.41
RER1-202ENST00000378512 FIBINQ8TAL6 211 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 WFDC5Q8TCV5 224 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 CPA5Q8WXQ8 436 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 PCDHB18PQ96TA0 734 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 SYT11Q9BT88 431 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 TTYH3Q9C0H2 523 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 TMEM51Q9NW97 253 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 DDIT4Q9NX09 232 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 THADAQ6YHU6 1953 aa17.62■□□□□ 0.41
RER1-202ENST00000378512 FOXD2O60548 495 aaPredicted RBP17.61■□□□□ 0.41
RER1-202ENST00000378512 ALDH1A2O94788 518 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 P2RY2P41231 377 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 CENPCQ03188 943 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 E2F5Q15329 346 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 TRNP1Q6NT89 227 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 IRF2BP2Q7Z5L9 587 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 ADIPOR2Q86V24 386 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 CHPFQ8IZ52 775 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 ATP6V0D2Q8N8Y2 350 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 MSANTD4Q8NCY6 345 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 WFIKKN2Q8TEU8 576 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 PCMTD1Q96MG8 357 aaPredicted RBP17.61■□□□□ 0.41
RER1-202ENST00000378512 EDEM2Q9BV94 578 aa17.61■□□□□ 0.41
RER1-202ENST00000378512 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.61■□□□□ 0.414e-16■□□□□ 9
RER1-202ENST00000378512 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 LNP1A1A4G5 178 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 TBL1XO60907 577 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 GABRG2P18507 467 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 IL12RB1P42701 662 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 PTGER3P43115 390 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 DHPSP49366 369 aaPredicted RBP17.6■□□□□ 0.41
RER1-202ENST00000378512 CXCR3P49682 368 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 RPS24P62847 133 aaKnown RBP17.6■□□□□ 0.41
RER1-202ENST00000378512 MAP7D1Q3KQU3 841 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 SLC25A52Q3SY17 297 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 C5orf22Q49AR2 442 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 FILIP1LQ4L180 1135 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 C2CD6Q53TS8 623 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 KIAA1211LQ6NV74 962 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 LUZP1Q86V48 1076 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 TMEFF1Q8IYR6 380 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 FAM204AQ9H8W3 233 aa17.6■□□□□ 0.41
RER1-202ENST00000378512 ABCB8Q9NUT2 735 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms