RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 RNF157Q96PX1 679 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 TMEM106CQ9BVX2 250 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 C2CD2Q9Y426 696 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 SMIM35A0A1B0GVV1 85 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 LGR5O75473 907 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 ZMPSTE24O75844 475 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 KRT37O76014 449 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 SUN1O94901 812 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 ITGBL1O95965 494 aaPredicted RBP8.34□□□□□ -1.07
CKAP2-203ENST00000378037 NFKB1P19838 968 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 VEGFBP49765 207 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF268Q14587 947 aaPredicted RBP8.34□□□□□ -1.07
CKAP2-203ENST00000378037 USP10Q14694 798 aaKnown RBP8.34□□□□□ -1.07
CKAP2-203ENST00000378037 ARMC12Q5T9G4 340 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 LGSNQ5TDP6 509 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 POU5F2Q8N7G0 328 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 PLD5Q8N7P1 536 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 SMG8Q8ND04 991 aaKnown RBP8.34□□□□□ -1.07
CKAP2-203ENST00000378037 ING5Q8WYH8 240 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 RPL10LQ96L21 214 aaKnown RBP8.34□□□□□ -1.07
CKAP2-203ENST00000378037 FCRL2Q96LA5 508 aaPredicted RBP8.34□□□□□ -1.07
CKAP2-203ENST00000378037 KCTD15Q96SI1 283 aaPredicted RBP8.34□□□□□ -1.07
CKAP2-203ENST00000378037 CRTAC1Q9NQ79 661 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 MAN1C1Q9NR34 630 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 TMLHEQ9NVH6 421 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 GTF2IRD1Q9UHL9 959 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 SLC12A6Q9UHW9 1150 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 GJD2Q9UKL4 321 aa8.34□□□□□ -1.07
CKAP2-203ENST00000378037 DNALI1O14645 258 aaPredicted RBP8.34□□□□□ -1.08
CKAP2-203ENST00000378037 FSCN2O14926 492 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 PER2O15055 1255 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 TRAPPC3O43617 180 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 MBL2P11226 248 aaPredicted RBP8.34□□□□□ -1.08
CKAP2-203ENST00000378037 CCR1P32246 355 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 HSPA9P38646 679 aaKnown RBP8.34□□□□□ -1.08
CKAP2-203ENST00000378037 MOGSQ13724 837 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 CLEC20AQ6ZU45 233 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 PRPF39Q86UA1 669 aaKnown RBP8.34□□□□□ -1.08
CKAP2-203ENST00000378037 DDI1Q8WTU0 396 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 GTF3C2Q8WUA4 911 aaPredicted RBP8.34□□□□□ -1.08
CKAP2-203ENST00000378037 HTR3CQ8WXA8 447 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 P2RY11Q96G91 374 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 CSPG4P5Q96PW8 444 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 CCDC68Q9H2F9 335 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 CYP3A43Q9HB55 503 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 POPDC2Q9HBU9 364 aa8.34□□□□□ -1.08
CKAP2-203ENST00000378037 TXNDC9O14530 226 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 CBX6O95503 412 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 LSM8O95777 96 aaKnown RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 ENO1P06733 434 aaKnown RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 TROVE2P10155 538 aaKnown RBP eCLIP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 MSX2P35548 267 aaPredicted RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 EIF3BP55884 814 aaKnown RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 PRPSAP1Q14558 356 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 CHI3L2Q15782 390 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 TAC4Q86UU9 113 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 KATNAL2Q8IYT4 538 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 LGI2Q8N0V4 545 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 STAMBPL1Q96FJ0 436 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 PAWRQ96IZ0 340 aaKnown RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 TASP1Q9H6P5 420 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 DMAP1Q9NPF5 467 aaPredicted RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 AVENQ9NQS1 362 aaPredicted RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 ADGRA2Q96PE1 1338 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 SPTA1P02549 2419 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 GPR32O75388 356 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 LRIG2O94898 1065 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 MRPS5P82675 430 aaKnown RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 GALNT3Q14435 633 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 ARHGAP17Q68EM7 881 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 TRNP1Q6NT89 227 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 LRRTM3Q86VH5 581 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 DIS3LQ8TF46 1054 aaKnown RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 CPT1BQ92523 772 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 PTPRN2Q92932 1015 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 GPR62Q9BZJ7 368 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 IL1RL2Q9HB29 575 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 CHRAC1Q9NRG0 131 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 HACD3Q9P035 362 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 MARCH2Q9P0N8 246 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 V9GYQ6 96 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 IGKV6D-21A0A0A0MT36 114 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 C3orf70A6NLC5 250 aaPredicted RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 C2CD4BA6NLJ0 364 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 C9JVG2 144 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 H0Y626 953 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 PPP1R12AO14974 1030 aaPredicted RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 DDHD2O94830 711 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 AGTP01019 485 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 PAEPP09466 180 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 ATICP31939 592 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 PNPLA4P41247 253 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 PTGIRP43119 386 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 RPS24P62847 133 aaKnown RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 SGO1Q5FBB7 561 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 DPY19L2P1Q6NXN4 242 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 LCLAT1Q6UWP7 414 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 C17orf99Q6UX52 265 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 RPS27LQ71UM5 84 aaKnown RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 IGDCC3Q8IVU1 814 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms