RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 MS4A13Q5J8X5 152 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 PMS2CLQ68D20 193 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 TMEM215Q68D42 235 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 MBLAC2Q68D91 279 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 SMYD5Q6GMV2 418 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 LPCAT2Q7L5N7 544 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 CYP2U1Q7Z449 544 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 ZDHHC17Q8IUH5 632 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 TMEFF1Q8IYR6 380 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 DEFB119Q8N690 84 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 EPS8L1Q8TE68 723 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 AZIN2Q96A70 460 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 MYEOVQ96EZ4 313 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 ZC3H10Q96K80 434 aaKnown RBP11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 BTN2A3PQ96KV6 586 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 STAP1Q9ULZ2 295 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 PLA2G4CQ9UP65 541 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 SIK3Q9Y2K2 1263 aa11.99□□□□□ -0.49
SMARCE1-203ENST00000377808 ATXN2Q99700 1313 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 SYCE3A1L190 88 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 KCNU1A8MYU2 1149 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 PRR5-ARHGAP8B1AHC4 643 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 NPC1O15118 1278 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 IGLV3-25P01717 112 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 ATP5BP06576 529 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 ZNF18P17022 549 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 TGM1P22735 817 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 PRKCHP24723 683 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 NOS2P35228 1153 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 GGCXP38435 758 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 ZNF165P49910 485 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 JAM2P57087 298 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 ARHGAP8P85298 464 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 RPL6Q02878 288 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 LMAN2Q12907 356 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 MAP7D1Q3KQU3 841 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 FUT11Q495W5 492 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 MPP7Q5T2T1 576 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 SND1Q7KZF4 910 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 SLC26A9Q7LBE3 791 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 PHLDB2Q86SQ0 1253 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 CIR1Q86X95 450 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 ZNF677Q86XU0 584 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 XYLT1Q86Y38 959 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 DHX40Q8IX18 779 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 ZNF366Q8N895 744 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 ZNF557Q8N988 423 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 OLIG1Q8TAK6 271 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 DDX1Q92499 740 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 PIGKQ92643 395 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 MBD1Q9UIS9 605 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 DAAM1Q9Y4D1 1078 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 PCDHGA5Q9Y5G8 931 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 SDK1Q7Z5N4 2213 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 GVINP1Q7Z2Y8 2422 aa11.98□□□□□ -0.49
SMARCE1-203ENST00000377808 SPAG17Q6Q759 2223 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 ABCB7O75027 752 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 NDUFS2O75306 463 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 ZNF217O75362 1048 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 LUC7L3O95232 432 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 MOCS3O95396 460 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 CAVIN2O95810 425 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 ATXN8OSP0DMR3 200 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 ACADMP11310 421 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 CDH5P33151 784 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 MATKP42679 507 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 ST8SIA6P61647 398 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 NOMO3P69849 1222 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 FMO1Q01740 532 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 CDR2Q01850 454 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 DEUP1Q05D60 604 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 FILIP1LQ4L180 1135 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 RABGAP1LQ5R372 815 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 TCEAL6Q6IPX3 200 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 SLC36A4Q6YBV0 504 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 MMS22LQ6ZRQ5 1243 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 DGLUCYQ7Z3D6 616 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 ADIPOR2Q86V24 386 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 ZNF397Q8NF99 534 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 TCEAL3Q969E4 200 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 MRGPRX1Q96LB2 322 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 RPRD1AQ96P16 312 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 BPIFA3Q9BQP9 254 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 C11orf70Q9BRQ4 267 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 IRX2Q9BZI1 471 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 SIK2Q9H0K1 926 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 HSD3B7Q9H2F3 369 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 PRDM16Q9HAZ2 1276 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 CD93Q9NPY3 652 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 METTL5Q9NRN9 209 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 VPS45Q9NRW7 570 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 NOCTQ9UK39 431 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 RALGAPA1Q6GYQ0 2036 aa11.97□□□□□ -0.49
SMARCE1-203ENST00000377808 FRYLO94915 3013 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 AP5Z1O43299 807 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 GDF9O60383 454 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 SERPINC1P01008 464 aa11.96□□□□□ -0.49
SMARCE1-203ENST00000377808 DLDP09622 509 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms