RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 SLC16A1P53985 500 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 STARD3Q14849 445 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 KPNB1Q14974 876 aaKnown RBP18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 CNGA2Q16280 664 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 CREG2Q8IUH2 290 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 LGI2Q8N0V4 545 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 RXFP1Q9HBX9 757 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 TNFSF13BQ9Y275 285 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 UBIAD1Q9Y5Z9 338 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 IFRD1O00458 451 aaPredicted RBP18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 USP17L7P0C7H9 530 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 BEX3Q00994 111 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 IYDQ6PHW0 289 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 FBXO39Q8N4B4 442 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 GLIS3Q8NEA6 775 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 APOPT1Q96IL0 206 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 CPNE1Q99829 537 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 CHST7Q9NS84 486 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 LZTS1Q9Y250 596 aa18.19■□□□□ 0.5
CNTNAP3-204ENST00000377656 IFNA14P01570 189 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 BMP6P22004 513 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 RBL1P28749 1068 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 RRM2P31350 389 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 NOS2P35228 1153 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 SKIV2L2P42285 1042 aaKnown RBP18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 PRKAA2P54646 552 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 DLG4P78352 724 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 PLD1Q13393 1074 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 ETNPPLQ8TBG4 499 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 WNT8BQ93098 351 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 TMEM159Q96B96 161 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 PHKG1Q16816 387 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 NMRAL1Q9HBL8 299 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 THAP1Q9NVV9 213 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 PDP2Q9P2J9 529 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 MAGEA13PA6NCF6 341 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 KIF1CO43896 1103 aaKnown RBP18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 PCDH8O95206 1070 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 MSH3P20585 1137 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 KDELR1P24390 212 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 DEFA1P59665 94 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 DEFA3P59666 94 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 ZNF844Q08AG5 666 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 ANKS6Q68DC2 871 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 CERS5Q8N5B7 392 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 KYQ8NBH2 561 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 LRRC39Q96DD0 335 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 FAM120BQ96EK7 910 aaKnown RBP18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 TSEN34Q9BSV6 310 aaKnown RBP18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 NDEL1Q9GZM8 345 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 TMEM39AQ9NV64 488 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 SMIM22K7EJ46 135 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 PCNAP12004 261 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 DARSP14868 501 aaKnown RBP18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 SLC1A6P48664 564 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 C11orf74Q86VG3 221 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 TMEM161BQ8NDZ6 487 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 DNAJC19Q96DA6 116 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 PRDM16Q9HAZ2 1276 aa18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 UXTQ9UBK9 157 aaPredicted RBP18.18■□□□□ 0.5
CNTNAP3-204ENST00000377656 SNTNA6NMZ2 147 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 IRF6O14896 467 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 RAD51BO15315 384 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 CCNT2O60583 730 aaKnown RBP18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 FAM153BP0C7A2 387 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 PTPN1P18031 435 aaKnown RBP18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 FAM153CQ494X1 144 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 MIER2Q8N344 545 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 SIGLEC16A6NMB1 481 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 DPYSL3Q14195 570 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 ZNF614Q8N883 585 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 LENG9Q96B70 501 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 APBA2Q99767 749 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 ZCCHC2Q9C0B9 1178 aaKnown RBP18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 FKBP6O75344 327 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 CYP1A1P04798 512 aaPredicted RBP18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 SLC2A4P14672 509 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 HOXB8P17481 243 aaPredicted RBP18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 MFSD4BQ5TF39 518 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 CES3Q6UWW8 571 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 LRRC55Q6ZSA7 311 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 KIAA0319LQ8IZA0 1049 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 AENQ8WTP8 325 aaKnown RBP18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 ABCC13Q9NSE7 274 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 UBA2Q9UBT2 640 aaPredicted RBP18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 VTI1BQ9UEU0 232 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 SEPT3Q9UH03 358 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 ZNF682O95780 498 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 PSMC3P17980 439 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 ITGB6P18564 788 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 CYP2A7P20853 494 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 ALDH6A1Q02252 535 aaKnown RBP18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 TGM3Q08188 693 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 TRMT5Q32P41 509 aaKnown RBP18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 COPS5Q92905 334 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 MIEF1Q9NQG6 463 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 MARCH2Q9P0N8 246 aa18.17■□□□□ 0.5
CNTNAP3-204ENST00000377656 IGSF6O95976 241 aa18.16■□□□□ 0.5
CNTNAP3-204ENST00000377656 DEFB107AQ8IZN7 70 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms