RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 DSELQ8IZU8 1212 aa9.27□□□□□ -0.93
CRNKL1-201ENST00000377327 FAM162AQ96A26 154 aa9.27□□□□□ -0.93
CRNKL1-201ENST00000377327 BBS2Q9BXC9 721 aa9.27□□□□□ -0.93
CRNKL1-201ENST00000377327 COG4Q9H9E3 785 aa9.27□□□□□ -0.93
CRNKL1-201ENST00000377327 EXOSC4Q9NPD3 245 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-201ENST00000377327 PIH1D1Q9NWS0 290 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-201ENST00000377327 C1orf167Q5SNV9 1468 aa9.27□□□□□ -0.93
CRNKL1-201ENST00000377327 TBKBP1A7MCY6 615 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 MYO1GB0I1T2 1018 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 MAFGO15525 162 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 FAM155BO75949 473 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 LRPAP1P30533 357 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 FOXD4Q12950 439 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 ORC1Q13415 861 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 TRIM25Q14258 630 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 OR7A2PQ8NGA2 310 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SKA2Q8WVK7 121 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 CIB1Q99828 191 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 NACA2Q9H009 215 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SPAG4Q9NPE6 437 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 NOCTQ9UK39 431 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 CLUHO75153 1309 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 TMEM191CA6NGB0 347 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 OR6B1O95007 311 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 OATP04181 439 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 CYP2F1P24903 491 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 HSD17B4P51659 736 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 CCDC85BQ15834 202 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SFT2D3Q587I9 215 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SNRNP48Q6IEG0 339 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 CES3Q6UWW8 571 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 S100ZQ8WXG8 99 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SEMA4DQ92854 862 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SLC10A4Q96EP9 437 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SERAC1Q96JX3 654 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 NSMCE2Q96MF7 247 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 LENG8Q96PV6 779 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 TBCBQ99426 244 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 PHF24Q9UPV7 400 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 EFR3BQ9Y2G0 817 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 RBMX2Q9Y388 322 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 RAP2CQ9Y3L5 183 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SNX9Q9Y5X1 595 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 XRN1Q8IZH2 1706 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 UBA6A0AVT1 1052 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SIGLEC16A6NMB1 481 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 IRF6O14896 467 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 OGTO15294 1046 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 HUS1O60921 280 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 RNASEH1O60930 286 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 PSMD10O75832 226 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 VAPBO95292 243 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 MED26O95402 600 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 CHRNB2P17787 502 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 RBBP7Q16576 425 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 OR52E8Q6IFG1 317 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 DRICH1Q6PGQ1 229 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 LINC00523Q86TU6 105 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 CDC26Q8NHZ8 85 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 USP33Q8TEY7 942 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 ULK4Q96C45 1275 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 PTCD3Q96EY7 689 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 AGBL1Q96MI9 1066 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 RNF145Q96MT1 663 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 C17orf80Q9BSJ5 609 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SIK2Q9H0K1 926 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 CDH19Q9H159 772 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 NOL11Q9H8H0 719 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 VANGL2Q9ULK5 521 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 NDUFAF1Q9Y375 327 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 ASB3Q9Y575 518 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 CASZ1Q86V15 1759 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 TMEM114B3SHH9 223 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 RGS5O15539 181 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 ZNF862O60290 1169 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 VDRP11473 427 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 CETPP11597 493 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 ALOX15P16050 662 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 ADSSP30520 456 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 STAT5BP51692 787 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 ITPK1Q13572 414 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 BAATQ14032 418 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 ADGRE1Q14246 886 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 ANKRD22Q5VYY1 191 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 NPNTQ6UXI9 565 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 FASTKD5Q7L8L6 764 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 EFL1Q7Z2Z2 1120 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 TNS4Q8IZW8 715 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 BEST2Q8NFU1 509 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 ACTRT2Q8TDY3 377 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 LRRC15Q8TF66 581 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 KIF12Q96FN5 646 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 MARK4Q96L34 752 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 PHF12Q96QT6 1004 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 KCTD14Q9BQ13 255 aaPredicted RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 THUMPD3Q9BV44 507 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 RIC8BQ9NVN3 520 aa9.26□□□□□ -0.93
CRNKL1-201ENST00000377327 TBCCD1Q9NVR7 557 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms