RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 COLEC11Q9BWP8 271 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 MANSC1Q9H8J5 431 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 ALG13Q9NP73 1137 aaKnown RBP20.82■□□□□ 0.92
VSX1-202ENST00000376709 RRN3Q9NYV6 651 aa20.82■□□□□ 0.92
VSX1-202ENST00000376709 THSD7BQ9C0I4 1608 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.81■□□□□ 0.92
VSX1-202ENST00000376709 WDR27A2RRH5 827 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 UGT1A9O60656 530 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 CSH1P0DML2 217 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 CSH2P0DML3 217 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 NEFHP12036 1026 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 PSMB4P28070 264 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 ALDH3A1P30838 453 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 ITGA7Q13683 1181 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 TP53INP2Q8IXH6 220 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 ZNF567Q8N184 647 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 TTC17Q96AE7 1141 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 PGBD4Q96DM1 585 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 CAPNS2Q96L46 248 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 UGT1A7Q9HAW7 530 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 UGT1A10Q9HAW8 530 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 UGT1A8Q9HAW9 530 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 CSNK1G1Q9HCP0 422 aa20.81■□□□□ 0.92
VSX1-202ENST00000376709 EIF2B3Q9NR50 452 aaKnown RBP20.81■□□□□ 0.92
VSX1-202ENST00000376709 PIH1D1Q9NWS0 290 aaKnown RBP20.81■□□□□ 0.92
VSX1-202ENST00000376709 SDR42E2A6NKP2 422 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 FAM159BA6NKW6 160 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 I6L893 689 aaPredicted RBP20.8■□□□□ 0.92
VSX1-202ENST00000376709 F9P00740 461 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 SESN2P58004 480 aaPredicted RBP20.8■□□□□ 0.92
VSX1-202ENST00000376709 NCALDP61601 193 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 CRADDP78560 199 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 CCDC15Q0P6D6 951 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 WASHC5Q12768 1159 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 IFRD2Q12894 506 aaPredicted RBP20.8■□□□□ 0.92
VSX1-202ENST00000376709 GRIK3Q13003 919 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 BMPR2Q13873 1038 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 PARP6Q2NL67 630 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 INTS6LQ5JSJ4 861 aaKnown RBP20.8■□□□□ 0.92
VSX1-202ENST00000376709 LRRC8BQ6P9F7 803 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 ZNF276Q8N554 614 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 PCSK9Q8NBP7 692 aaKnown RBP20.8■□□□□ 0.92
VSX1-202ENST00000376709 CD99L2Q8TCZ2 262 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 SRPK1Q96SB4 655 aaKnown RBP20.8■□□□□ 0.92
VSX1-202ENST00000376709 WDCPQ9H6R7 721 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 CFAP73A6NFT4 308 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 KCNK1O00180 336 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 ETV4P43268 484 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 SEMA3BQ13214 749 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 PID1Q7Z2X4 250 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 TBC1D1Q86TI0 1168 aaPredicted RBP20.8■□□□□ 0.92
VSX1-202ENST00000376709 APBB2Q92870 758 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 MTBPQ96DY7 904 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 LRRC37BQ96QE4 947 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 DMAP1Q9NPF5 467 aaPredicted RBP20.8■□□□□ 0.92
VSX1-202ENST00000376709 SRRDQ9UH36 339 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 DSEQ9UL01 958 aa20.8■□□□□ 0.92
VSX1-202ENST00000376709 AMHP03971 560 aa20.79■□□□□ 0.92
VSX1-202ENST00000376709 TUSC3Q13454 348 aa20.79■□□□□ 0.92
VSX1-202ENST00000376709 BHLHA9Q7RTU4 235 aa20.79■□□□□ 0.92
VSX1-202ENST00000376709 TKTL2Q9H0I9 626 aa20.79■□□□□ 0.92
VSX1-202ENST00000376709 NPHS2Q9NP85 383 aa20.79■□□□□ 0.92
VSX1-202ENST00000376709 KLHL8Q9P2G9 620 aaPredicted RBP20.79■□□□□ 0.92
VSX1-202ENST00000376709 DHRS4L1P0CG22 281 aa20.79■□□□□ 0.92
VSX1-202ENST00000376709 TROVE2P10155 538 aaKnown RBP eCLIP20.79■□□□□ 0.92
VSX1-202ENST00000376709 DSC3Q14574 896 aa20.79■□□□□ 0.92
VSX1-202ENST00000376709 TRIM71Q2Q1W2 868 aaKnown RBP20.79■□□□□ 0.92
VSX1-202ENST00000376709 FAM171BQ6P995 826 aa20.79■□□□□ 0.92
VSX1-202ENST00000376709 CHSY1Q86X52 802 aa20.79■□□□□ 0.92
VSX1-202ENST00000376709 EPAS1Q99814 870 aa20.79■□□□□ 0.92
VSX1-202ENST00000376709 RAD54BQ9Y620 910 aa20.79■□□□□ 0.92
VSX1-202ENST00000376709 NCAM2O15394 837 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 DCTN3O75935 186 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 CYP11A1P05108 521 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 YY1P25490 414 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 MGAT1P26572 445 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 HCAR3P49019 387 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 ACLYP53396 1101 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 MROH9Q5TGP6 573 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 OVOS1Q6IE37 1185 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 RNF180Q86T96 592 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 PARP9Q8IXQ6 854 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 ANKLE1Q8NAG6 615 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 C10orf82Q8WW14 230 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 IRGQQ8WZA9 623 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 PTPRN2Q92932 1015 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 RNF34Q969K3 372 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 ERP27Q96DN0 273 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 SLC13A1Q9BZW2 595 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 MOCS1Q9NZB8 636 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 OR12D3Q9UGF7 316 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 RFPL1O75677 317 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 TRPA1O75762 1119 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 ZNF189O75820 626 aaPredicted RBP20.78■□□□□ 0.92
VSX1-202ENST00000376709 SERPINB9P50453 376 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 MNAT1P51948 309 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 MAP3K21Q5TCX8 1036 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 NPWQ8N729 165 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 KLHL29Q96CT2 875 aa20.78■□□□□ 0.92
VSX1-202ENST00000376709 OXNAD1Q96HP4 312 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms