RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 SERPINB6P35237 376 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 THPOP40225 353 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 HCAR3P49019 387 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 TMPRSS15P98073 1019 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 AP1B1Q10567 949 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 PAFAH1B3Q15102 231 aaKnown RBP12.58□□□□□ -0.4
UBR4-203ENST00000375225 RAB6CQ53S08 254 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 SPANXN3Q5MJ09 141 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 ITPRIPL1Q6GPH6 555 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 SH2D5Q6ZV89 423 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 CLNKQ7Z7G1 428 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 FAM228AQ86W67 206 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 CCDC185Q8N715 623 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 TBC1D31Q96DN5 1066 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 THOC1Q96FV9 657 aaKnown RBP12.58□□□□□ -0.4
UBR4-203ENST00000375225 SLC2A13Q96QE2 648 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 SENP6Q9GZR1 1112 aaPredicted RBP12.58□□□□□ -0.4
UBR4-203ENST00000375225 RAB6CQ9H0N0 254 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 STN1Q9H668 368 aaKnown RBP12.58□□□□□ -0.4
UBR4-203ENST00000375225 EBF2Q9HAK2 575 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 CNGB3Q9NQW8 809 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 ARHGEF4Q9NR80 690 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 CHST12Q9NRB3 414 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 MTMR10Q9NXD2 777 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 KLK14Q9P0G3 267 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 IGSF9Q9P2J2 1179 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 HEY2Q9UBP5 337 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 DCDC2Q9UHG0 476 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 HAO1Q9UJM8 370 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 DCTN4Q9UJW0 460 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 PHF24Q9UPV7 400 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.58□□□□□ -0.4
UBR4-203ENST00000375225 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 C9IYK1 514 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 M0QYT0 321 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 RNF103O00237 685 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 HGSO14964 777 aaPredicted RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 GPR182O15218 404 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 ALDH1A2O94788 518 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 METTL18O95568 372 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 BGNP21810 368 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 LMO2P25791 158 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 PCSK1P29120 753 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 COG7P83436 770 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 MGAT3Q09327 533 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 E2F5Q15329 346 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 INSCQ1MX18 579 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 UBXN11Q5T124 520 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 DENND5BQ6ZUT9 1274 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 PRPF39Q86UA1 669 aaKnown RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 MTDHQ86UE4 582 aaKnown RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 LONP2Q86WA8 852 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 FAM131BQ86XD5 332 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 NDUFAF2Q8N183 169 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 ZNF276Q8N554 614 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 CCNYQ8ND76 341 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 CLEC4CQ8WTT0 213 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 NT5C3BQ969T7 300 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 PPP1R2P1Q96PQ5 205 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 NPY6RQ99463 290 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 VAT1Q99536 393 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 TMEM120AQ9BXJ8 343 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 ADAM33Q9BZ11 813 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 UNC93B1Q9H1C4 597 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 ADAM28Q9UKQ2 775 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 TRHDEQ9UKU6 1024 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 CDH9Q9ULB4 789 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 SORCS3Q9UPU3 1222 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 NME7Q9Y5B8 376 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 USP3Q9Y6I4 520 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 GABBR2O75899 941 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 ESRRAP11474 423 aaPredicted RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 RPL9P32969 192 aaKnown RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 NRLP54845 237 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 TPI1P60174 286 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 C1QTNF8P60827 252 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 SCAPQ12770 1279 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 SLC10A2Q12908 348 aaPredicted RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 MTM1Q13496 603 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 FRG1Q14331 258 aaKnown RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 PRPSAP1Q14558 356 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 GRTP1Q5TC63 336 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 DSTYKQ6XUX3 929 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 RFX8Q6ZV50 586 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 WDR75Q8IWA0 830 aaKnown RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 PPP4R1Q8TF05 950 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 AGAP11Q8TF27 550 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 IRGQQ8WZA9 623 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 MCUR1Q96AQ8 359 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 EPAS1Q99814 870 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 MMADHCQ9H3L0 296 aaPredicted RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 TLE6Q9H808 572 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 PAK6Q9NQU5 681 aaPredicted RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 TRMT13Q9NUP7 481 aaKnown RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 MOCS1Q9NZB8 636 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 BFARQ9NZS9 450 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 SIRPGQ9P1W8 387 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 KLHL8Q9P2G9 620 aaPredicted RBP12.57□□□□□ -0.4
UBR4-203ENST00000375225 MCM8Q9UJA3 840 aa12.57□□□□□ -0.4
UBR4-203ENST00000375225 MID2Q9UJV3 735 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms