RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TBX10O75333 385 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 CORO1AP31146 461 aaKnown RBP17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 CHRNA3P32297 505 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 SLC11A2P49281 568 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 ZXDBP98169 803 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 USP4Q13107 963 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 AUHQ13825 339 aaKnown RBP17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 PAFAH1B3Q15102 231 aaKnown RBP17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 CCNG2Q16589 344 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 FAM133BQ5BKY9 247 aaKnown RBP17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 NCBP2-AS2Q69YL0 99 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 NKD2Q969F2 451 aaPredicted RBP17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 WBP2Q969T9 261 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 RUNDC3BQ96NL0 473 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 SLITRK6Q9H5Y7 841 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 GKN1Q9NS71 199 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 SMPD4Q9NXE4 827 aa17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 NUP210Q8TEM1 1887 aaPredicted RBP17.78■□□□□ 0.44
HLA-DMA-201ENST00000374843 WASH4PA8MWX3 477 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 GFRA2O00451 464 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 PECAM1P16284 738 aaPredicted RBP17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 GGCXP38435 758 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 NR2C2P49116 596 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 NOMO1Q15155 1222 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 C14orf80Q86SX3 495 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 CHSY1Q86X52 802 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 KIAA1958Q8N8K9 716 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 MYRIPQ8NFW9 859 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 SLC35B2Q8TB61 432 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 ITFG1Q8TB96 612 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 SLCO2A1Q92959 643 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 SIK2Q9H0K1 926 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 ADAM7Q9H2U9 754 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 RETREG1Q9H6L5 497 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 AGO1Q9UL18 857 aaKnown RBP17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 RAD54BQ9Y620 910 aa17.77■□□□□ 0.44
HLA-DMA-201ENST00000374843 DENND4AQ7Z401 1863 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 DRGXA6NNA5 263 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 LIASO43766 372 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 IRF1P10914 325 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 ERCC2P18074 760 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 TACR2P21452 398 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 AMPD1P23109 780 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 FSHRP23945 695 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 EPHB2P29323 1055 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 AVPR1AP37288 418 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 DYNLT1P63172 113 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 OTUD4Q01804 1114 aaKnown RBP17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 OASLQ15646 514 aaKnown RBP17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 ADGRF1Q5T601 910 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 RAP1GAP2Q684P5 730 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 GPR153Q6NV75 609 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 FBXL22Q6P050 247 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 TTC27Q6P3X3 843 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 POTEHQ6S545 545 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 HTR3DQ70Z44 454 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 NLRP14Q86W24 1093 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 DENND1CQ8IV53 801 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 NPAS3Q8IXF0 933 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 ACTL9Q8TC94 416 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 ATG4AQ8WYN0 398 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 USP13Q92995 863 aaPredicted RBP17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 MAGOHBQ96A72 148 aaKnown RBP17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 MSLNLQ96KJ4 702 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 OLFM3Q96PB7 478 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 DDX50Q9BQ39 737 aaKnown RBP17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 DDX47Q9H0S4 455 aaKnown RBP17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 S1PR5Q9H228 398 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 CATSPERBQ9H7T0 1116 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 KIF9Q9HAQ2 790 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 ETNK2Q9NVF9 386 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 ZNF212Q9UDV6 495 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 PCYOX1Q9UHG3 505 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 LSM7Q9UK45 103 aaKnown RBP17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 ZNF510Q9Y2H8 683 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 DOCK6Q96HP0 2047 aa17.76■□□□□ 0.43
HLA-DMA-201ENST00000374843 LEFTY2O00292 366 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 MFSD11O43934 449 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 PRAMEF12O95522 483 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 RHOQP17081 205 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 SLC6A4P31645 630 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 COILP38432 576 aaPredicted RBP17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 VCPP55072 806 aaKnown RBP17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 GBE1Q04446 702 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 ZNF77Q15935 545 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 TMCO3Q6UWJ1 677 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 LRRC31Q6UY01 552 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 RTL3Q8N8U3 475 aaKnown RBP17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 C1orf54Q8WWF1 131 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 PABPC5Q96DU9 382 aaKnown RBP17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 LRCH3Q96II8 777 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 PRICKLE1Q96MT3 831 aaPredicted RBP17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 KRT12Q99456 494 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 ZYG11BQ9C0D3 744 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 KLC2Q9H0B6 622 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 STIM2Q9P246 746 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 CFAP97Q9P2B7 532 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 VANGL2Q9ULK5 521 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 MFHAS1Q9Y4C4 1052 aa17.75■□□□□ 0.43
HLA-DMA-201ENST00000374843 REV3LO60673 3130 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms