RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 KCTD6Q8NC69 237 aa18.13■□□□□ 0.49
PFDN6-201ENST00000374606 ING5Q8WYH8 240 aa18.13■□□□□ 0.49
PFDN6-201ENST00000374606 RMDN1Q96DB5 314 aa18.13■□□□□ 0.49
PFDN6-201ENST00000374606 SLC12A6Q9UHW9 1150 aa18.13■□□□□ 0.49
PFDN6-201ENST00000374606 CPQQ9Y646 472 aa18.13■□□□□ 0.49
PFDN6-201ENST00000374606 NUP210Q8TEM1 1887 aaPredicted RBP18.12■□□□□ 0.49
PFDN6-201ENST00000374606 STK25O00506 426 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 CES2O00748 559 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 CEP104O60308 925 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 PYGMP11217 842 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 AVPR1AP37288 418 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 CDH6P55285 790 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 MTA1Q13330 715 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 PDK2Q15119 407 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 DPYSL2Q16555 572 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 CA9Q16790 459 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 DGLUCYQ7Z3D6 616 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 MAP7D3Q8IWC1 876 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 UNC45BQ8IWX7 931 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 COG1Q8WTW3 980 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 RAPGEF5Q92565 580 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 RNF25Q96BH1 459 aaPredicted RBP18.12■□□□□ 0.49
PFDN6-201ENST00000374606 CYP2S1Q96SQ9 504 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 KLF16Q9BXK1 252 aaPredicted RBP18.12■□□□□ 0.49
PFDN6-201ENST00000374606 CALN1Q9BXU9 219 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 SLC46A2Q9BY10 475 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 RRAGDQ9NQL2 400 aaPredicted RBP18.12■□□□□ 0.49
PFDN6-201ENST00000374606 TMPRSS4Q9NRS4 437 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 WNT16Q9UBV4 365 aa18.12■□□□□ 0.49
PFDN6-201ENST00000374606 MED19A0JLT2 244 aaPredicted RBP18.11■□□□□ 0.49
PFDN6-201ENST00000374606 KCNU1A8MYU2 1149 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 PAGE1O75459 146 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 STC2O76061 302 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 IRF1P10914 325 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 KDELR1P24390 212 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 HARS2P49590 506 aaKnown RBP18.11■□□□□ 0.49
PFDN6-201ENST00000374606 TUBB2AQ13885 445 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 PPP6R3Q5H9R7 873 aaPredicted RBP18.11■□□□□ 0.49
PFDN6-201ENST00000374606 SPOCD1Q6ZMY3 1216 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 GET4Q7L5D6 327 aaPredicted RBP18.11■□□□□ 0.49
PFDN6-201ENST00000374606 CMTM8Q8IZV2 173 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 ITFG1Q8TB96 612 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 ZFRQ96KR1 1074 aaKnown RBP18.11■□□□□ 0.49
PFDN6-201ENST00000374606 BTN2A3PQ96KV6 586 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 CAPZA3Q96KX2 299 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 HAPLN3Q96S86 360 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 KCTD15Q96SI1 283 aaPredicted RBP18.11■□□□□ 0.49
PFDN6-201ENST00000374606 TUBB2BQ9BVA1 445 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 PCDH18Q9HCL0 1135 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 ANLNQ9NQW6 1124 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 GKN1Q9NS71 199 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 ARHGAP26Q9UNA1 814 aa18.11■□□□□ 0.49
PFDN6-201ENST00000374606 WDR87Q6ZQQ6 2873 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 I6L893 689 aaPredicted RBP18.1■□□□□ 0.49
PFDN6-201ENST00000374606 ZNF185O15231 689 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 NARSO43776 548 aaKnown RBP18.1■□□□□ 0.49
PFDN6-201ENST00000374606 ARL4AP40617 200 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 ARSEP51690 589 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 COPS2P61201 443 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 PPP2R5EQ16537 467 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 CCDC181Q5TID7 509 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 MFSD7Q6UXD7 560 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 DDX42Q86XP3 938 aaKnown RBP eCLIP18.1■□□□□ 0.49
PFDN6-201ENST00000374606 PYROXD2Q8N2H3 581 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 EPAS1Q99814 870 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 ZNF670Q9BS34 389 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 CDC23Q9UJX2 597 aa18.1■□□□□ 0.49
PFDN6-201ENST00000374606 LSM7Q9UK45 103 aaKnown RBP18.1■□□□□ 0.49
PFDN6-201ENST00000374606 OTOGLQ3ZCN5 2332 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 H3BRJ5 948 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 PGRMC1O00264 195 aaKnown RBP18.09■□□□□ 0.49
PFDN6-201ENST00000374606 CD48P09326 243 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 CORO1AP31146 461 aaKnown RBP18.09■□□□□ 0.49
PFDN6-201ENST00000374606 L1CAMP32004 1257 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 GBP2P32456 591 aaPredicted RBP18.09■□□□□ 0.49
PFDN6-201ENST00000374606 CDKN2BP42772 138 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 SLC11A2P49281 568 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 ZNF135P52742 658 aaPredicted RBP18.09■□□□□ 0.49
PFDN6-201ENST00000374606 DPYSL3Q14195 570 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 TFDP3Q5H9I0 405 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 AADACL2Q6P093 401 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 ZC3H14Q6PJT7 736 aaKnown RBP18.09■□□□□ 0.49
PFDN6-201ENST00000374606 VSIG1Q86XK7 387 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 NPAS3Q8IXF0 933 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 KIAA2013Q8IYS2 634 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 FAM71BQ8TC56 605 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 HINFPQ9BQA5 517 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 DCLK3Q9C098 648 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 OSBPL2Q9H1P3 480 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 TBC1D17Q9HA65 648 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 CFAP97Q9P2B7 532 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 RCOR3Q9P2K3 495 aaPredicted RBP18.09■□□□□ 0.49
PFDN6-201ENST00000374606 XPO7Q9UIA9 1087 aaKnown RBP18.09■□□□□ 0.49
PFDN6-201ENST00000374606 SH3BP1Q9Y3L3 701 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 MRFAP1Q9Y605 127 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 HS3ST4Q9Y661 456 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 R4GN57 208 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 CEP250Q9BV73 2442 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 DMXL1Q9Y485 3027 aa18.09■□□□□ 0.49
PFDN6-201ENST00000374606 CACNA1BQ00975 2339 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms