RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 C5orf22Q49AR2 442 aa12.95□□□□□ -0.34
PRPF4-202ENST00000374199 PAN2Q504Q3 1202 aaKnown RBP12.95□□□□□ -0.34
PRPF4-202ENST00000374199 HEATR6Q6AI08 1181 aaKnown RBP12.95□□□□□ -0.34
PRPF4-202ENST00000374199 DBF4BQ8NFT6 615 aa12.95□□□□□ -0.34
PRPF4-202ENST00000374199 FBF1Q8TES7 1133 aa12.95□□□□□ -0.34
PRPF4-202ENST00000374199 HASPINQ8TF76 798 aa12.95□□□□□ -0.34
PRPF4-202ENST00000374199 OXNAD1Q96HP4 312 aaPredicted RBP12.95□□□□□ -0.34
PRPF4-202ENST00000374199 SGSM3Q96HU1 749 aa12.95□□□□□ -0.34
PRPF4-202ENST00000374199 VAT1Q99536 393 aa12.95□□□□□ -0.34
PRPF4-202ENST00000374199 LGMNQ99538 433 aa12.95□□□□□ -0.34
PRPF4-202ENST00000374199 EBNA1BP2Q99848 306 aaKnown RBP12.95□□□□□ -0.34
PRPF4-202ENST00000374199 MRPL9Q9BYD2 267 aaKnown RBP12.95□□□□□ -0.34
PRPF4-202ENST00000374199 NMUR1Q9HB89 426 aa12.95□□□□□ -0.34
PRPF4-202ENST00000374199 DDIT4Q9NX09 232 aa12.95□□□□□ -0.34
PRPF4-202ENST00000374199 BCCIPQ9P287 314 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRPF4-202ENST00000374199 PPARGC1AQ9UBK2 798 aaKnown RBP12.95□□□□□ -0.34
PRPF4-202ENST00000374199 TLR6Q9Y2C9 796 aa12.95□□□□□ -0.34
PRPF4-202ENST00000374199 MTSS1O43312 755 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 LRIG2O94898 1065 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 DHRS4L1P0CG22 281 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 PTPN3P26045 913 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 CCNFP41002 786 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 FAAP100Q0VG06 881 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 QPCTQ16769 361 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 ACBD5Q5T8D3 534 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-202ENST00000374199 C3orf62Q6ZUJ4 267 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 MON1AQ86VX9 555 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 SPATA2LQ8IUW3 424 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-202ENST00000374199 ZNF567Q8N184 647 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 SEPT8Q92599 483 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 FCRL2Q96LA5 508 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-202ENST00000374199 TKTL2Q9H0I9 626 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 PRDM12Q9H4Q4 367 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 PRDM5Q9NQX1 630 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-202ENST00000374199 SMG5Q9UPR3 1016 aaKnown RBP12.94□□□□□ -0.34
PRPF4-202ENST00000374199 ANAPC1Q9H1A4 1944 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 FGF10O15520 208 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-202ENST00000374199 STX2P32856 288 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 SLC11A1P49279 550 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 CSRP3P50461 194 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 NIPAL4Q0D2K0 466 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 B4GALNT4Q76KP1 1039 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 CCDC117Q8IWD4 279 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-202ENST00000374199 BCL7CQ8WUZ0 217 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-202ENST00000374199 PAFAH2Q99487 392 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 GPR62Q9BZJ7 368 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 CENPHQ9H3R5 247 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 WDCPQ9H6R7 721 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 OR12D3Q9UGF7 316 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 TBX21Q9UL17 535 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 PCDHA11Q9Y5I1 949 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 RNF103O00237 685 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 YY1P25490 414 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 CD68P34810 354 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-202ENST00000374199 NME3Q13232 169 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 EFTUD2Q15029 972 aaKnown RBP eCLIP12.94□□□□□ -0.342e-10■■■■□ 21.3
PRPF4-202ENST00000374199 SLC39A12Q504Y0 691 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 SLC8B1Q6J4K2 584 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 RSPO2Q6UXX9 243 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-202ENST00000374199 NUP93Q8N1F7 819 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 ARHGAP18Q8N392 663 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 BANPQ8N9N5 519 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 CASP10Q92851 521 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 ZNF689Q96CS4 500 aaPredicted RBP12.94□□□□□ -0.34
PRPF4-202ENST00000374199 CYTH2Q99418 400 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 FBXO44Q9H4M3 255 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 CWH43Q9H720 699 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 TRHDEQ9UKU6 1024 aa12.94□□□□□ -0.34
PRPF4-202ENST00000374199 TLDC2A0PJX2 215 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 ERICH4A6NGS2 130 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 ERI2A8K979 691 aaKnown RBP12.93□□□□□ -0.34
PRPF4-202ENST00000374199 GOLGA8MH3BSY2 632 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 GALTP07902 379 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 CDR1P51861 262 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 NEK3P51956 506 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 WDR4P57081 412 aaKnown RBP12.93□□□□□ -0.34
PRPF4-202ENST00000374199 SLC39A5Q6ZMH5 540 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 TIFABQ6ZNK6 161 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 CCNJLQ8IV13 435 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 ANKMY2Q8IV38 441 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 TP53INP2Q8IXH6 220 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 ISL2Q96A47 359 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 MAGEB18Q96M61 343 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 PRMT1Q99873 361 aaKnown RBP12.93□□□□□ -0.34
PRPF4-202ENST00000374199 VN1R3Q9BXE9 311 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 GBA3Q9H227 469 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.93□□□□□ -0.34
PRPF4-202ENST00000374199 DENND4CQ5VZ89 1909 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 AVILO75366 819 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 IL1BP01584 269 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 ELAVL2Q12926 359 aaKnown RBP12.93□□□□□ -0.34
PRPF4-202ENST00000374199 NAB1Q13506 487 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 PKN2Q16513 984 aaKnown RBP12.93□□□□□ -0.34
PRPF4-202ENST00000374199 UNC5AQ6ZN44 842 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 ZNF419Q96HQ0 510 aaPredicted RBP12.93□□□□□ -0.34
PRPF4-202ENST00000374199 EPAS1Q99814 870 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 RETREG1Q9H6L5 497 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 CASS4Q9NQ75 786 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 SMYD2Q9NRG4 433 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 INTS9Q9NV88 658 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms